Gene M446_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1647 
Symbol 
ID6128918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp1841413 
End bp1842297 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID641641905 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001768574 
Protein GI170739919 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.123391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACCCG ATCGCGTCAC CTTCGGGGGC TGGCGGCTGC CGCTCCTCCT GCTCCTGCCG 
CAGCTCCTGA CGGTGGCATT GTTCTTCTAC TGGCCGGCCG TCCAGGCGGT CGGCCAGTCC
TTCCTGGCGC AGGACGCCTT CGGGCTCGCG AGCGAGTTCG TGGGCTTCGA CAATTACCGG
GCCCTGTTCG CCGACCCGGC CTATTACGGC GCGCTCGGCG TCACGGCCGT GTTCTCGGCC
GCGGTGGCGG GGCTGTCGCT CGGCCTCGCG CTGCTCCTTG CCGTGATGGC CGACCGGGAA
CTCGCCGGGG CGGGCCTCTA CCGCACCCTC CTGATCTGGC CCTACGCGGT GGCGCCCGCG
GTGGCCGGGG TGCTGTTCGG CTTCCTGTTC CAGCCCTCCC TCGGCATCGT CGCGCGGGGG
CTGCGCGACC TCGGCGTTGC CTGGAACCCG CTCCTCGACG GCACCCACGC CCTGATCCTC
GTGGTCATGG CCGCCGCCTG GAAGCAGATC TCGTACAATT TCCTGTTCTT CCTCGCCGGG
CTGCAGGCGA TCCCGCGCAG CGTGATCGAG GCGGCGGCGA TCGACGGGGC GGGGCCGGCG
CGGCGGTTCT GGACCATCGT GTTCCCGCTG CTCTCGCCCA CCACCTTCTT CCTCCTCGTC
GTCAACGTGG TCTACGCGTT CTGCGAGACG TTCGGGACGA TCGACGTCCT CACCCATGGC
GGGCCGGGCC GGGCCACCCA GACCCTCGTC TACAAAGTCT ACCAGGACGG GCGCACCGGC
TCGGATCTCG GCGCCTCCGC GGCCCAGTCC GTGGTGCTGA TGATCATCGT GATCGCCCTC
ACGGCGGTCC AGTTCCGCAC CGTCGAGCGC AAGGTCGCGT ATTAG
 
Protein sequence
MGPDRVTFGG WRLPLLLLLP QLLTVALFFY WPAVQAVGQS FLAQDAFGLA SEFVGFDNYR 
ALFADPAYYG ALGVTAVFSA AVAGLSLGLA LLLAVMADRE LAGAGLYRTL LIWPYAVAPA
VAGVLFGFLF QPSLGIVARG LRDLGVAWNP LLDGTHALIL VVMAAAWKQI SYNFLFFLAG
LQAIPRSVIE AAAIDGAGPA RRFWTIVFPL LSPTTFFLLV VNVVYAFCET FGTIDVLTHG
GPGRATQTLV YKVYQDGRTG SDLGASAAQS VVLMIIVIAL TAVQFRTVER KVAY