More than 300 homologs were found in PanDaTox collection
for query gene Sros_5003 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_5003  sugar ABC transporter permease protein  100 
 
 
299 aa  586  1e-166  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0579954  normal  0.148596 
 
 
-
 
NC_009380  Strop_1188  binding-protein-dependent transport systems inner membrane component  80.9 
 
 
290 aa  439  9.999999999999999e-123  Salinispora tropica CNB-440  Bacteria  normal  0.176458  normal 
 
 
-
 
NC_009953  Sare_1081  binding-protein-dependent transport systems inner membrane component  79.86 
 
 
290 aa  435  1e-121  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000808201 
 
 
-
 
NC_013947  Snas_2014  binding-protein-dependent transport systems inner membrane component  73.17 
 
 
292 aa  409  1e-113  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.897509  normal  0.176027 
 
 
-
 
NC_013530  Xcel_2115  binding-protein-dependent transport systems inner membrane component  63.54 
 
 
319 aa  360  1e-98  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.438975  n/a   
 
 
-
 
NC_013521  Sked_14800  carbohydrate ABC transporter membrane protein  67.12 
 
 
317 aa  355  3.9999999999999996e-97  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.755142  normal  0.0255978 
 
 
-
 
NC_013172  Bfae_10960  carbohydrate ABC transporter membrane protein  57.84 
 
 
298 aa  345  4e-94  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2255  binding-protein-dependent transport systems inner membrane component  60.98 
 
 
293 aa  333  2e-90  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.705558  normal  0.0136161 
 
 
-
 
NC_010816  BLD_0193  MalF-type ABC sugar transport systems permease component  45.86 
 
 
312 aa  236  3e-61  Bifidobacterium longum DJO10A  Bacteria  normal  0.192938  n/a   
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  35.69 
 
 
310 aa  194  2e-48  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  38.11 
 
 
293 aa  183  4.0000000000000006e-45  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
299 aa  182  6e-45  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  38.55 
 
 
303 aa  179  4e-44  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  34.24 
 
 
308 aa  174  1.9999999999999998e-42  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
294 aa  166  5e-40  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
294 aa  166  5e-40  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
309 aa  164  2.0000000000000002e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014212  Mesil_0285  binding-protein-dependent transport systems inner membrane component  33 
 
 
318 aa  163  3e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  36.47 
 
 
310 aa  161  1e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
300 aa  160  2e-38  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
300 aa  160  2e-38  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
320 aa  159  6e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  32.78 
 
 
306 aa  157  3e-37  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  31.43 
 
 
315 aa  157  3e-37  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
324 aa  157  3e-37  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
294 aa  154  2e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
318 aa  152  7e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
313 aa  152  7e-36  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
318 aa  151  1e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
300 aa  151  2e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
291 aa  150  2e-35  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
295 aa  150  2e-35  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  34.57 
 
 
322 aa  150  2e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_008820  P9303_15561  putative lactose transporter  35.02 
 
 
302 aa  150  3e-35  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.334934 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
309 aa  150  3e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  31.33 
 
 
314 aa  149  4e-35  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  31.33 
 
 
314 aa  149  4e-35  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
310 aa  149  6e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
311 aa  149  6e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  33.11 
 
 
320 aa  148  1.0000000000000001e-34  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
298 aa  148  1.0000000000000001e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
300 aa  147  2.0000000000000003e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
314 aa  147  2.0000000000000003e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
318 aa  146  4.0000000000000006e-34  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  35.09 
 
 
279 aa  146  4.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  32.38 
 
 
290 aa  146  5e-34  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  33.11 
 
 
318 aa  145  7.0000000000000006e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  35.1 
 
 
316 aa  144  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  29.66 
 
 
295 aa  145  1e-33  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
353 aa  143  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_012669  Bcav_2273  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
302 aa  143  4e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  32.85 
 
 
275 aa  143  4e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
315 aa  143  4e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
314 aa  143  4e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013530  Xcel_0918  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
298 aa  142  5e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
299 aa  142  5e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_3894  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
326 aa  142  6e-33  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
318 aa  142  9e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
294 aa  142  9e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  31.08 
 
 
317 aa  140  1.9999999999999998e-32  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
311 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
312 aa  141  1.9999999999999998e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  38.7 
 
 
316 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  38.29 
 
 
314 aa  140  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
299 aa  141  1.9999999999999998e-32  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
325 aa  140  3e-32  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
316 aa  140  3.9999999999999997e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_013131  Caci_7515  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
314 aa  139  6e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  32.51 
 
 
321 aa  139  6e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
317 aa  138  8.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
316 aa  138  8.999999999999999e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  32.78 
 
 
305 aa  138  1e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
323 aa  137  1e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  31.62 
 
 
289 aa  138  1e-31  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_013421  Pecwa_0973  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
293 aa  138  1e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
306 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012917  PC1_3522  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
331 aa  137  2e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.98 
 
 
300 aa  137  2e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  35 
 
 
292 aa  137  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
302 aa  136  4e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
310 aa  136  4e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0737  binding-protein-dependent transport systems inner membrane component  28.28 
 
 
293 aa  136  5e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  34 
 
 
294 aa  135  6.0000000000000005e-31  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2024  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
303 aa  135  6.0000000000000005e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000249122  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  34.86 
 
 
314 aa  135  6.0000000000000005e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
319 aa  135  6.0000000000000005e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
310 aa  135  7.000000000000001e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013421  Pecwa_3671  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
332 aa  135  7.000000000000001e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  33.66 
 
 
321 aa  135  8e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
305 aa  135  8e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  29.82 
 
 
321 aa  135  9.999999999999999e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  31.27 
 
 
288 aa  134  9.999999999999999e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
316 aa  134  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
316 aa  134  9.999999999999999e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
316 aa  135  9.999999999999999e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
307 aa  135  9.999999999999999e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  33.22 
 
 
307 aa  134  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  29.97 
 
 
307 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
309 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
309 aa  133  3e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
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