More than 300 homologs were found in PanDaTox collection
for query gene Arth_3894 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_3894  binding-protein-dependent transport systems inner membrane component  100 
 
 
326 aa  640    Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2273  binding-protein-dependent transport systems inner membrane component  65.16 
 
 
302 aa  381  1e-105  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_04920  permease component of ABC-type sugar transporter  63.51 
 
 
292 aa  365  1e-100  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3156  binding-protein-dependent transport systems inner membrane component  55.07 
 
 
304 aa  313  2.9999999999999996e-84  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.024116  normal  0.392098 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
300 aa  196  3e-49  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
299 aa  173  3.9999999999999995e-42  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
353 aa  165  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
310 aa  164  3e-39  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
298 aa  163  5.0000000000000005e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  37.01 
 
 
291 aa  162  6e-39  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
314 aa  161  2e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  34.18 
 
 
314 aa  157  2e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
295 aa  155  8e-37  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
319 aa  154  2e-36  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
325 aa  152  7e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
295 aa  152  8e-36  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
308 aa  151  1e-35  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.79 
 
 
306 aa  150  3e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
299 aa  150  3e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
309 aa  150  3e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
309 aa  149  5e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  31.71 
 
 
325 aa  149  6e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
318 aa  149  7e-35  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  28.52 
 
 
289 aa  147  2.0000000000000003e-34  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
292 aa  147  2.0000000000000003e-34  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
293 aa  147  2.0000000000000003e-34  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  30.91 
 
 
314 aa  147  3e-34  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_012793  GWCH70_1464  binding-protein-dependent transport systems inner membrane component  33.1 
 
 
292 aa  146  4.0000000000000006e-34  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
315 aa  146  5e-34  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
316 aa  146  6e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  33.44 
 
 
321 aa  146  6e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
293 aa  145  7.0000000000000006e-34  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  34.51 
 
 
288 aa  145  7.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
279 aa  145  1e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_013530  Xcel_2612  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
365 aa  144  2e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  34.27 
 
 
294 aa  144  2e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  33.33 
 
 
293 aa  144  2e-33  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  34.73 
 
 
314 aa  143  4e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
308 aa  142  6e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  35.67 
 
 
300 aa  142  6e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0945  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
290 aa  142  7e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
317 aa  142  8e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
310 aa  142  9e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  35.23 
 
 
293 aa  141  9.999999999999999e-33  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
310 aa  142  9.999999999999999e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_009338  Mflv_3852  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
310 aa  141  9.999999999999999e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0634568 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
309 aa  141  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_6585  lactose transport system (permease)  35.12 
 
 
306 aa  141  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
316 aa  141  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_013530  Xcel_2115  binding-protein-dependent transport systems inner membrane component  35.04 
 
 
319 aa  140  1.9999999999999998e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.438975  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
307 aa  140  3e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
306 aa  140  3e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
294 aa  140  3.9999999999999997e-32  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0507  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
299 aa  139  4.999999999999999e-32  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000030377  n/a   
 
 
-
 
NC_008726  Mvan_2543  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
310 aa  139  6e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.944367  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
299 aa  139  7e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
318 aa  139  7.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  34.84 
 
 
287 aa  138  1e-31  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  30.74 
 
 
301 aa  138  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
297 aa  139  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
320 aa  138  1e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
311 aa  137  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  32.33 
 
 
312 aa  137  3.0000000000000003e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_10960  carbohydrate ABC transporter membrane protein  35.56 
 
 
298 aa  137  3.0000000000000003e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7038  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
309 aa  137  3.0000000000000003e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  31.53 
 
 
320 aa  137  3.0000000000000003e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
306 aa  136  4e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
304 aa  136  4e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1558  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
322 aa  137  4e-31  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal  0.637369 
 
 
-
 
NC_011884  Cyan7425_0944  binding-protein-dependent transport systems inner membrane component  37.14 
 
 
290 aa  136  4e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.120711  normal  0.307929 
 
 
-
 
NC_013946  Mrub_2809  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
279 aa  136  4e-31  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.232459 
 
 
-
 
NC_009953  Sare_1507  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
323 aa  136  4e-31  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000203032 
 
 
-
 
NC_013947  Snas_0204  binding-protein-dependent transport systems inner membrane component  32.88 
 
 
299 aa  136  4e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.497209  normal  0.169553 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  32.99 
 
 
322 aa  137  4e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  32.32 
 
 
319 aa  135  8e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_013739  Cwoe_4453  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
319 aa  135  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2714  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
293 aa  134  9.999999999999999e-31  Marinomonas sp. MWYL1  Bacteria  normal  0.548655  normal 
 
 
-
 
NC_009664  Krad_0964  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
313 aa  135  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.194798  decreased coverage  0.00518822 
 
 
-
 
NC_013131  Caci_5331  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
324 aa  135  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.455385  normal  0.753701 
 
 
-
 
NC_013526  Tter_2024  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
303 aa  135  9.999999999999999e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000249122  n/a   
 
 
-
 
NC_011661  Dtur_0174  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
290 aa  134  1.9999999999999998e-30  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.417375  n/a   
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  30.15 
 
 
328 aa  134  1.9999999999999998e-30  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_010816  BLD_0193  MalF-type ABC sugar transport systems permease component  31.97 
 
 
312 aa  134  1.9999999999999998e-30  Bifidobacterium longum DJO10A  Bacteria  normal  0.192938  n/a   
 
 
-
 
NC_012669  Bcav_0555  binding-protein-dependent transport systems inner membrane component  33.23 
 
 
328 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.913769 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
310 aa  134  3e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1067  sugar ABC transporter permease  30.3 
 
 
293 aa  133  3e-30  Yersinia pestis Angola  Bacteria  normal  normal  0.224825 
 
 
-
 
NC_013411  GYMC61_3365  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
292 aa  134  3e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_0285  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
318 aa  133  3e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  36.29 
 
 
294 aa  133  3.9999999999999996e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  31.83 
 
 
311 aa  132  6e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_009708  YpsIP31758_0529  sugar ABC transporter, permease protein  30.3 
 
 
293 aa  132  6e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_06330  carbohydrate ABC transporter membrane protein  29.31 
 
 
368 aa  132  6e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0590  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
293 aa  132  6e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
335 aa  132  6.999999999999999e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_013172  Bfae_29440  permease component of ABC-type sugar transporter  33.33 
 
 
318 aa  132  9e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
293 aa  132  9e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
295 aa  131  1.0000000000000001e-29  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_012669  Bcav_0179  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
315 aa  131  1.0000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
292 aa  132  1.0000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  32.03 
 
 
299 aa  132  1.0000000000000001e-29  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
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