| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1188 |
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| Symbol | |
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| ID | 5057638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1334922 |
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| End bp | 1335794 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640473457 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001158036 |
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| Protein GI | 145593739 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.176458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC AGCGTTGGTT CACCCCCTGG TTGTTGCTCG CGCCCGCGGC CGTCTGGCTG
CTGGTGTTCA ACCTCTGGCC AGCGATCAAC ACCGTGGTCC TCGCGTTCAC CAACGCCAAG
CCACTCGGCG GTGGAAGCTT CACTGGCCTG GCCAACTTCG AGCGCATGCT CAACGACGAG
CAACTCGTCT ATGCGCTGGT GAACAGCATC GTTTACATGC TGGTCTGCCT ACCCCTGCTG
CTCTTTCTGC CGCTGCTGCT CGCGGTGCTG CTCGAGAAGA AGCTGCCCGG TATCACGTTC
TTTCGTACCG CCTTCTACAC CCCGGTGATC GCCTCCGCGG TGGTCGTGGC GCTGATCTGG
ACCTGGTTGC TGGAGGACCG CGGCCTCGTC AACGGTCTGG CCCAACAGCT CGGCTTCATC
ACCGAACCGT TGCCCTTCCT CAGCGGGCGT TGGCTGCTGC TGTTCAGCGC GATCAGCCTC
ACCGTCTGGA AGGGGCTCGG TTACTACATG ATCATCTATC TGTCGGCTCT GGGGAACGTC
TCGCGCCAGC TGCACGAGGC GGCCGCGGTT GACGGCGCCG GTCCGATCCG CCGGTTCTGG
TCGGTCACCG TGCCCGGTGT GCGCACCACG ATGTTGCTGG TCAGTGTCCT GGTCACCGTC
TCCGCACTGC GGGTCTTCAC CGAGTTGTTC GTCCTCACCA ACGGCACCGG TGGCCCCGGC
GGCCGGACCA TGTCCCTGGT CATGCTCATC CAGATGTACA GCCGGGGCTT CACCGGGCAC
CTCGGCTACG CCTCGGCGCT CAGCCTGTTG TTGTTCGTGA TCACTGTCGG CCCCATGCTT
CTCCTCCTGC GCCTGAACCG GAAGGCGGCC TAG
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| Protein sequence | MKTQRWFTPW LLLAPAAVWL LVFNLWPAIN TVVLAFTNAK PLGGGSFTGL ANFERMLNDE
QLVYALVNSI VYMLVCLPLL LFLPLLLAVL LEKKLPGITF FRTAFYTPVI ASAVVVALIW
TWLLEDRGLV NGLAQQLGFI TEPLPFLSGR WLLLFSAISL TVWKGLGYYM IIYLSALGNV
SRQLHEAAAV DGAGPIRRFW SVTVPGVRTT MLLVSVLVTV SALRVFTELF VLTNGTGGPG
GRTMSLVMLI QMYSRGFTGH LGYASALSLL LFVITVGPML LLLRLNRKAA
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