More than 300 homologs were found in PanDaTox collection
for query gene Sked_14800 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_14800  carbohydrate ABC transporter membrane protein  100 
 
 
317 aa  629  1e-179  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.755142  normal  0.0255978 
 
 
-
 
NC_009380  Strop_1188  binding-protein-dependent transport systems inner membrane component  67.93 
 
 
290 aa  377  1e-103  Salinispora tropica CNB-440  Bacteria  normal  0.176458  normal 
 
 
-
 
NC_009953  Sare_1081  binding-protein-dependent transport systems inner membrane component  67.59 
 
 
290 aa  375  1e-103  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000808201 
 
 
-
 
NC_013947  Snas_2014  binding-protein-dependent transport systems inner membrane component  65.98 
 
 
292 aa  377  1e-103  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.897509  normal  0.176027 
 
 
-
 
NC_013595  Sros_5003  sugar ABC transporter permease protein  67.84 
 
 
299 aa  353  2e-96  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0579954  normal  0.148596 
 
 
-
 
NC_013172  Bfae_10960  carbohydrate ABC transporter membrane protein  56.25 
 
 
298 aa  337  9.999999999999999e-92  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2115  binding-protein-dependent transport systems inner membrane component  56.81 
 
 
319 aa  337  9.999999999999999e-92  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.438975  n/a   
 
 
-
 
NC_013131  Caci_2255  binding-protein-dependent transport systems inner membrane component  56.36 
 
 
293 aa  317  2e-85  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.705558  normal  0.0136161 
 
 
-
 
NC_010816  BLD_0193  MalF-type ABC sugar transport systems permease component  46.57 
 
 
312 aa  246  3e-64  Bifidobacterium longum DJO10A  Bacteria  normal  0.192938  n/a   
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  34.16 
 
 
310 aa  189  4e-47  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  40 
 
 
293 aa  185  7e-46  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
303 aa  180  2.9999999999999997e-44  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
299 aa  177  2e-43  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
294 aa  171  1e-41  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
294 aa  171  1e-41  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  34.16 
 
 
308 aa  170  3e-41  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
310 aa  165  9e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  36.6 
 
 
306 aa  165  1.0000000000000001e-39  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  36.53 
 
 
318 aa  158  9e-38  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_014212  Mesil_0285  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
318 aa  158  1e-37  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
309 aa  157  2e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
314 aa  156  5.0000000000000005e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
311 aa  155  6e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  36.21 
 
 
322 aa  153  4e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
309 aa  152  1e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
291 aa  150  2e-35  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
320 aa  149  5e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
309 aa  149  9e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  33.89 
 
 
318 aa  148  1.0000000000000001e-34  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
295 aa  147  2.0000000000000003e-34  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  33.54 
 
 
318 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_009486  Tpet_0117  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
300 aa  146  4.0000000000000006e-34  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0115  binding-protein-dependent transport systems inner membrane component  32.07 
 
 
300 aa  146  4.0000000000000006e-34  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
312 aa  145  6e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
324 aa  145  6e-34  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  30.53 
 
 
317 aa  145  7.0000000000000006e-34  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
294 aa  145  8.000000000000001e-34  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4135  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
299 aa  145  9e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
300 aa  145  9e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  28.81 
 
 
311 aa  144  1e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009708  YpsIP31758_3574  carbohydrate ABC transporter permease  33.57 
 
 
294 aa  144  2e-33  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3708  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
294 aa  144  2e-33  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A4017  carbohydrate ABC transporter permease  33.57 
 
 
294 aa  144  3e-33  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  26.82 
 
 
315 aa  142  5e-33  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  39.74 
 
 
302 aa  142  6e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_008820  P9303_15561  putative lactose transporter  35.48 
 
 
302 aa  142  6e-33  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.334934 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  32.62 
 
 
322 aa  142  7e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  33.45 
 
 
290 aa  142  9e-33  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_012669  Bcav_1516  binding-protein-dependent transport systems inner membrane component  35.06 
 
 
315 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0640497  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
299 aa  141  1.9999999999999998e-32  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  33.02 
 
 
321 aa  140  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  37 
 
 
314 aa  140  3e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
294 aa  140  3.9999999999999997e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  33 
 
 
307 aa  140  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
298 aa  139  6e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
316 aa  139  7e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2160  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
292 aa  139  7e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.07173  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
306 aa  139  8.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
295 aa  138  1e-31  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.28 
 
 
300 aa  138  1e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  33.23 
 
 
353 aa  138  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
316 aa  138  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_008261  CPF_1114  sugar ABC transporter, permease protein  30.9 
 
 
301 aa  137  2e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  0.212611  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  30.84 
 
 
317 aa  137  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0428  binding-protein-dependent transport systems inner membrane component  30.4 
 
 
310 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  32.5 
 
 
306 aa  138  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
310 aa  137  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  29.97 
 
 
328 aa  137  3.0000000000000003e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  30.1 
 
 
320 aa  137  3.0000000000000003e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3522  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
331 aa  137  3.0000000000000003e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  31.25 
 
 
321 aa  136  4e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012669  Bcav_0179  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
315 aa  136  4e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
299 aa  136  4e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013131  Caci_7515  binding-protein-dependent transport systems inner membrane component  29.7 
 
 
314 aa  136  5e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  30.82 
 
 
316 aa  136  6.0000000000000005e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3671  binding-protein-dependent transport systems inner membrane component  33 
 
 
332 aa  136  6.0000000000000005e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  30.66 
 
 
307 aa  135  8e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_3894  binding-protein-dependent transport systems inner membrane component  30 
 
 
326 aa  135  9e-31  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  30.79 
 
 
310 aa  135  9.999999999999999e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
300 aa  135  9.999999999999999e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1667  binding-protein-dependent transport systems inner membrane component  27.56 
 
 
296 aa  135  9.999999999999999e-31  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.227806  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
321 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
312 aa  134  1.9999999999999998e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_012912  Dd1591_0663  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
333 aa  134  1.9999999999999998e-30  Dickeya zeae Ech1591  Bacteria  normal  0.440104  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  29.33 
 
 
299 aa  134  1.9999999999999998e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4149  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
296 aa  134  1.9999999999999998e-30  Opitutus terrae PB90-1  Bacteria  decreased coverage  0.00598191  normal  0.10352 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
313 aa  134  1.9999999999999998e-30  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013510  Tcur_1735  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
328 aa  133  3e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  0.152171  n/a   
 
 
-
 
NC_014210  Ndas_1084  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
315 aa  134  3e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.31256  normal  0.442716 
 
 
-
 
NC_012880  Dd703_0715  binding-protein-dependent transport systems inner membrane component  32.67 
 
 
333 aa  133  5e-30  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  28.63 
 
 
314 aa  132  6e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  28.63 
 
 
314 aa  132  6e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  29.79 
 
 
288 aa  132  6e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
315 aa  132  6.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  26.99 
 
 
299 aa  132  7.999999999999999e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  28.83 
 
 
294 aa  132  9e-30  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  30.5 
 
 
324 aa  132  1.0000000000000001e-29  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
318 aa  132  1.0000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_008528  OEOE_0254  ABC-type sugar transport system, permease component  28.19 
 
 
310 aa  130  2.0000000000000002e-29  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  36.28 
 
 
319 aa  130  2.0000000000000002e-29  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
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