| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5003 |
|---|
| Symbol | |
|---|
| ID | 8668297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5528882 |
|---|
| End bp | 5529781 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | sugar ABC transporter permease protein |
|---|
| Protein accession | YP_003340545 |
|---|
| Protein GI | 271966349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0579954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.148596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTACA CCGCACCGAC CCGCCCGAGG CGGCTGCGCC GCCTGTTCAC GCCCTGGGTG
CTGGTGGCGC CCGCCGCCCT GTGGCTGCTC GTGTTCAACG TCTGGCCGTC GATCAACACG
ATCGTCCTGG CGTTCACGAA CGCGAAGCCG CTGGGCGGCG GGCACTTCAC CGGCCTGGAC
AACTTCGCCC GGGTGCTGAG CGACGGCCAG CTCGCCGACG CGCTGCTCAA CAGCATCGTG
TTCATGCTGG TCTGCCTGCC GCTGCTCACG GTCCTGCCGC TGCTGCTGGC GATCCTGGTC
GAGAAGAAGA TCCCGGGAAT CGCGTTCTTC CGCACGGCCT TCTACACGCC CGTCGTCGCC
TCCGCCGTGG TGGTCGCGCT GATCTGGAGC TGGGTGCTCA GCGACCGGGG CCTGGTCAAC
GGCTTCGCGC AGTGGCTGGG GATCATCGCC GAGCCGGTCC CGTTCCTCAC CGAGCGCTGG
CTCCTGGTGT TCAGCGCCAT CTCCCTGACC GTGTGGAAGG GCCTCGGCTA CTACATGATC
ATCTATCTGT CGGCGCTCGG GAACGTCCGG CGGGAGCTGC ACGAGGCCGC TGCCGTGGAC
GGGGCCGGGC CGATCCGCCG GTTCTGGAAC GTGACCGTCC CCGGCGTGCG GAACACGATG
CTGCTGGTCT CGGTGATGGT GGCGGTCTCG GCGCTGCGCG TGTTCTCGGA GCTGTTCGTG
CTCTCGAACG GCACCGGCGG GCCCGGCGGG CGCGCCCAGT CCGTCGTGAT GCTCATCCAG
ATGTACAGCC GCGGCTTCTA CGGCCACTTC GGCTACGCCT CGGCGCTCAG CATCGTGCTG
CTCGTCATCA CGCTCGGCCC GATGCTCCTG CTGCTCCGGC TCAACAGGAA GGCGACCTGA
|
|---|
| Protein sequence | MTYTAPTRPR RLRRLFTPWV LVAPAALWLL VFNVWPSINT IVLAFTNAKP LGGGHFTGLD
NFARVLSDGQ LADALLNSIV FMLVCLPLLT VLPLLLAILV EKKIPGIAFF RTAFYTPVVA
SAVVVALIWS WVLSDRGLVN GFAQWLGIIA EPVPFLTERW LLVFSAISLT VWKGLGYYMI
IYLSALGNVR RELHEAAAVD GAGPIRRFWN VTVPGVRNTM LLVSVMVAVS ALRVFSELFV
LSNGTGGPGG RAQSVVMLIQ MYSRGFYGHF GYASALSIVL LVITLGPMLL LLRLNRKAT
|
|---|
| |