More than 300 homologs were found in PanDaTox collection
for query gene Shel_23930 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_23930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  100 
 
 		 226 aa  455  1e-127  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00212671  normal  1 
 
 
-
 
NC_008530  LGAS_0710  DNA-binding response regulator  43.93 
 
 		 221 aa  189  2.9999999999999997e-47  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00420398  normal  1 
 
 
-
 
NC_009513  Lreu_0058  two component transcriptional regulator  43.46 
 
 		 221 aa  182  3e-45  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000000551146  n/a   
 
 
-
 
NC_011830  Dhaf_2301  two component transcriptional regulator, winged helix family  40.78 
 
 		 225 aa  171  1e-41  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000205811  n/a   
 
 
-
 
NC_013203  Apar_1236  two component transcriptional regulator, winged helix family  40.27 
 
 		 224 aa  166  2.9999999999999998e-40  Atopobium parvulum DSM 20469  Bacteria  normal  0.532106  normal  1 
 
 
-
 
NC_008346  Swol_2177  response regulator receiver protein  41.36 
 
 		 223 aa  164  1.0000000000000001e-39  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00323539  n/a   
 
 
-
 
NC_004116  SAG1792  DNA-binding response regulator  37.56 
 
 		 224 aa  163  2.0000000000000002e-39  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0238902  n/a   
 
 
-
 
NC_009012  Cthe_0799  two component transcriptional regulator  36.8 
 
 		 225 aa  161  6e-39  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG1328  DNA-binding response regulator  41.26 
 
 		 228 aa  160  2e-38  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00114355  n/a   
 
 
-
 
NC_009656  PSPA7_5497  DNA-binding response regulator  41.5 
 
 		 221 aa  154  9e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  0.553345  n/a   
 
 
-
 
NC_009664  Krad_3036  two component transcriptional regulator, winged helix family  40 
 
 		 273 aa  152  2.9999999999999998e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  normal  1 
 
 
-
 
NC_008463  PA14_63150  two-component response regulator  41 
 
 		 221 aa  152  4e-36  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.388672  normal  1 
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  35.71 
 
 		 224 aa  150  1e-35  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_011126  HY04AAS1_1151  two component transcriptional regulator, winged helix family  32.58 
 
 		 225 aa  150  2e-35  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_03590  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  39.55 
 
 		 226 aa  149  5e-35  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  0.0594239 
 
 
-
 
NC_003909  BCE_2675  DNA-binding response regulator  35.75 
 
 		 224 aa  148  8e-35  Bacillus cereus ATCC 10987  Bacteria  normal  0.0180828  n/a   
 
 
-
 
NC_013204  Elen_0373  two component transcriptional regulator, winged helix family  35.45 
 
 		 237 aa  148  8e-35  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013517  Sterm_2324  two component transcriptional regulator, winged helix family  37.75 
 
 		 223 aa  147  1.0000000000000001e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.237639  n/a   
 
 
-
 
NC_013093  Amir_2632  two component transcriptional regulator, winged helix family  41.18 
 
 		 229 aa  145  4.0000000000000006e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_3686  response regulator receiver  38.46 
 
 		 233 aa  145  5e-34  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B3366  DNA-binding response regulator  38.29 
 
 		 225 aa  145  5e-34  Bacillus cereus G9842  Bacteria  normal  0.166078  hitchhiker  0.00000000000000126215 
 
 
-
 
NC_011725  BCB4264_A1962  DNA-binding response regulator  38.29 
 
 		 225 aa  145  5e-34  Bacillus cereus B4264  Bacteria  normal  0.597164  n/a   
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  40.71 
 
 		 406 aa  145  6e-34  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_0615  two component transcriptional regulator  37.5 
 
 		 228 aa  145  7.0000000000000006e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0841359  normal  0.719107 
 
 
-
 
NC_010001  Cphy_1620  two component transcriptional regulator  36.36 
 
 		 227 aa  144  8.000000000000001e-34  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000174219  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  38.57 
 
 		 232 aa  144  1e-33  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_009665  Shew185_0604  two component transcriptional regulator  37.39 
 
 		 227 aa  143  2e-33  Shewanella baltica OS185  Bacteria  decreased coverage  0.00704602  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2492  two component transcriptional regulator  36.65 
 
 		 224 aa  143  2e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.22217  n/a   
 
 
-
 
NC_011725  BCB4264_A2673  DNA-binding response regulator  35.75 
 
 		 224 aa  143  2e-33  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0632  two component transcriptional regulator  37.39 
 
 		 227 aa  143  2e-33  Shewanella baltica OS195  Bacteria  normal  0.157641  normal  1 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  37.67 
 
 		 240 aa  143  3e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_1345  response regulator receiver  34.8 
 
 		 227 aa  142  4e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.71904 
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  38.01 
 
 		 233 aa  142  4e-33  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_013411  GYMC61_0523  two component transcriptional regulator, winged helix family  37.25 
 
 		 224 aa  142  5e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A2062  DNA-binding response regulator  37.84 
 
 		 225 aa  142  5e-33  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000169038  n/a   
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  37.93 
 
 		 250 aa  141  6e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  38.16 
 
 		 231 aa  141  6e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.312171 
 
 
-
 
NC_011898  Ccel_1157  two component transcriptional regulator, winged helix family  35.96 
 
 		 233 aa  141  7e-33  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  37.72 
 
 		 231 aa  141  7e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  34.21 
 
 		 234 aa  141  8e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  34.21 
 
 		 234 aa  141  8e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  37.44 
 
 		 229 aa  141  9e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_009565  TBFG_10613  two component system DNA binding transcriptional regulatory protein tcrA  38.91 
 
 		 253 aa  141  9e-33  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000499525  normal  0.750249 
 
 
-
 
NC_003909  BCE_2041  DNA-binding response regulator  37.39 
 
 		 225 aa  140  9.999999999999999e-33  Bacillus cereus ATCC 10987  Bacteria  normal  0.0972255  n/a   
 
 
-
 
NC_011729  PCC7424_4284  two component transcriptional regulator, winged helix family  37.44 
 
 		 227 aa  140  9.999999999999999e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  38.33 
 
 		 230 aa  140  9.999999999999999e-33  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  38.33 
 
 		 230 aa  140  9.999999999999999e-33  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.354926 
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  38.91 
 
 		 236 aa  140  9.999999999999999e-33  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  38.33 
 
 		 230 aa  140  9.999999999999999e-33  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal  1 
 
 
-
 
NC_013205  Aaci_2264  two component transcriptional regulator, winged helix family  40.3 
 
 		 231 aa  140  1.9999999999999998e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00910741  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2944  two component transcriptional regulator  39.62 
 
 		 224 aa  139  3e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0958095  n/a   
 
 
-
 
NC_009664  Krad_3620  two component transcriptional regulator, winged helix family  38.5 
 
 		 239 aa  139  3e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0253056  normal  0.477246 
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  37.67 
 
 		 232 aa  139  3.9999999999999997e-32  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_007413  Ava_3453  two component transcriptional regulator  37.44 
 
 		 224 aa  139  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009802  CCC13826_1969  response regulator receiver domain-containing protein  39.05 
 
 		 219 aa  139  3.9999999999999997e-32  Campylobacter concisus 13826  Bacteria  normal  0.478098  n/a   
 
 
-
 
NC_010001  Cphy_2827  two component transcriptional regulator  36.2 
 
 		 230 aa  139  3.9999999999999997e-32  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_13797  two component transcriptional regulatory protein  41.18 
 
 		 286 aa  139  4.999999999999999e-32  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.173423 
 
 
-
 
NC_011773  BCAH820_3235  DNA-binding response regulator  39.62 
 
 		 224 aa  139  4.999999999999999e-32  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011884  Cyan7425_3411  two component transcriptional regulator, winged helix family  35.27 
 
 		 224 aa  139  4.999999999999999e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.591115  normal  1 
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  37.56 
 
 		 226 aa  139  4.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A3221  DNA-binding response regulator  38.5 
 
 		 224 aa  139  4.999999999999999e-32  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_2296  two component transcriptional regulator  38.01 
 
 		 255 aa  139  4.999999999999999e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.398969  normal  0.240289 
 
 
-
 
NC_011772  BCG9842_B2033  DNA-binding response regulator  39.62 
 
 		 224 aa  138  6e-32  Bacillus cereus G9842  Bacteria  normal  0.725953  normal  1 
 
 
-
 
NC_014248  Aazo_2741  winged helix family two component transcriptional regulator  37.07 
 
 		 250 aa  138  6e-32  'Nostoc azollae' 0708  Bacteria  normal  0.0957275  n/a   
 
 
-
 
NC_008528  OEOE_0142  DNA-binding response regulator  34.36 
 
 		 231 aa  138  7e-32  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_10999  two component response transcriptional regulatory protein MprA  38.46 
 
 		 230 aa  138  7e-32  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000188235  normal  0.671639 
 
 
-
 
NC_013521  Sked_32700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.1 
 
 		 271 aa  138  7.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.442824  normal  0.485424 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  37.22 
 
 		 225 aa  138  8.999999999999999e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008820  P9303_26471  two-component response regulator  35.85 
 
 		 268 aa  137  1e-31  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.889517 
 
 
-
 
NC_013522  Taci_0717  two component transcriptional regulator, winged helix family  36.53 
 
 		 226 aa  137  1e-31  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000154116  n/a   
 
 
-
 
NC_013517  Sterm_0528  two component transcriptional regulator, winged helix family  36.15 
 
 		 230 aa  137  1e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  37.61 
 
 		 228 aa  137  1e-31  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.682961 
 
 
-
 
NC_011094  SeSA_A2928  transcriptional regulatory protein TctD  38.29 
 
 		 224 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.501058  normal  0.269412 
 
 
-
 
NC_007512  Plut_1212  two component transcriptional regulator  36.79 
 
 		 232 aa  137  1e-31  Chlorobium luteolum DSM 273  Bacteria  normal  0.0899901  normal  0.616229 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  35.43 
 
 		 234 aa  137  1e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_011080  SNSL254_A2981  transcriptional regulator TctD  38.29 
 
 		 224 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.510212 
 
 
-
 
NC_011205  SeD_A3084  transcriptional regulator TctD  38.29 
 
 		 224 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B2897  DNA-binding response regulator TctD  38.29 
 
 		 224 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  37.61 
 
 		 228 aa  137  1e-31  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C2964  transcriptional regulator TctD  38.29 
 
 		 224 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  hitchhiker  0.000947102 
 
 
-
 
NC_009486  Tpet_0521  two component transcriptional regulator  35.02 
 
 		 223 aa  137  1e-31  Thermotoga petrophila RKU-1  Bacteria  normal  0.720367  n/a   
 
 
-
 
NC_013165  Shel_13160  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.7 
 
 		 228 aa  137  1e-31  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.719024 
 
 
-
 
NC_008609  Ppro_2957  two component transcriptional regulator  34.68 
 
 		 223 aa  137  1e-31  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000000406961  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  37.61 
 
 		 228 aa  137  1e-31  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.850641 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  36.65 
 
 		 237 aa  137  2e-31  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1991  DNA-binding response regulator  37.61 
 
 		 254 aa  137  2e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.9362699999999994e-45 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  35.11 
 
 		 236 aa  137  2e-31  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  36.44 
 
 		 236 aa  136  2e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  32.9 
 
 		 236 aa  136  3.0000000000000003e-31  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_007516  Syncc9605_2378  two component transcriptional regulator  36.32 
 
 		 262 aa  136  3.0000000000000003e-31  Synechococcus sp. CC9605  Bacteria  normal  1  normal  0.936352 
 
 
-
 
NC_014158  Tpau_3631  two component transcriptional regulator, winged helix family  38.33 
 
 		 235 aa  136  3.0000000000000003e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1277  two component transcriptional regulator  37.33 
 
 		 233 aa  136  3.0000000000000003e-31  Methylibium petroleiphilum PM1  Bacteria  normal  0.0649233  normal  0.253886 
 
 
-
 
NC_013515  Smon_0737  two component transcriptional regulator, winged helix family  36.1 
 
 		 224 aa  136  3.0000000000000003e-31  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  36.28 
 
 		 228 aa  136  3.0000000000000003e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal  1 
 
 
-
 
NC_011661  Dtur_0537  two component transcriptional regulator, winged helix family  34.53 
 
 		 224 aa  135  4e-31  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0716782  n/a   
 
 
-
 
NC_009565  TBFG_10772  two component system response transcriptional positive regulator phoP  35.96 
 
 		 247 aa  135  4e-31  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.864575 
 
 
-
 
NC_014248  Aazo_0389  winged helix family two component transcriptional regulator  37.25 
 
 		 224 aa  135  4e-31  'Nostoc azollae' 0708  Bacteria  normal  0.667669  n/a   
 
 
-
 
NC_007908  Rfer_0578  two component transcriptional regulator  37 
 
 		 240 aa  135  4e-31  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_2514  two component transcriptional regulator, winged helix family  36.04 
 
 		 226 aa  135  4e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.24701  n/a   
 
 
-
 
NC_007974  Rmet_5798  winged helix family two component transcriptional regulator  42.51 
 
 		 242 aa  135  4e-31  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.0751826 
 
 
-
 
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