| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1620 |
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| Symbol | |
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| ID | 5744441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1998403 |
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| End bp | 1999086 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292720 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001558731 |
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| Protein GI | 160879763 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000174219 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATAT TATTGATTGA AGATGAAAAA TACATGGCAG AAGCTGTGGC GCAGGTTTTA
CGCAAGAACA ATTATACTGT CGATTTAGCC CATGATGGTG AGTATGGGCT TGATTGTGCG
TTGTCAGCTA TCTACGATAT CATTATACTT GATATCATGT TGCCTAAAAT GAATGGGTTG
GATGTTCTAA AGTCTTTACG TAGAGAAAAA ATTGCCACTC CTGTAATACT ACTATCCGCC
AAAGGGGAAA CCGAAGACAA GGTAAGAGGA CTGGATACCG GTGCGGATGA TTATCTACCA
AAGCCATTTA AAACCGAAGA GCTTCTTGCT CGTTTGCGTG CGTTAGGGCG CAGAAAGGGT
GAAATTATTC CGGAAGGTAT ATTGTCTTAT GGTGATATAG AACTTAATCC CAATACGCTG
GATGTGTATT GTGGTAAAAA AACATACAAA TTAACCCTAA AAGAAAGCCA GCTTTTAGAA
TTACTTATGA ACATGAAAGG TATGGTTATC TCAAAAAATT ACATTATCGA AAAGCTGTGG
GGCTTTGATG GTGAAGCAGA AGATAACCAT GTGGAGGTAT ACATCTCTTT TCTGCGTAAA
AAACTGGCTG CACTAGGTTC AACGAATACA ATTCAAACTA TACGAGGTCT TGGATACATG
TTAAAAATGG TAAAGGAAGA ATAA
|
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| Protein sequence | MRILLIEDEK YMAEAVAQVL RKNNYTVDLA HDGEYGLDCA LSAIYDIIIL DIMLPKMNGL
DVLKSLRREK IATPVILLSA KGETEDKVRG LDTGADDYLP KPFKTEELLA RLRALGRRKG
EIIPEGILSY GDIELNPNTL DVYCGKKTYK LTLKESQLLE LLMNMKGMVI SKNYIIEKLW
GFDGEAEDNH VEVYISFLRK KLAALGSTNT IQTIRGLGYM LKMVKEE
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