| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2981 |
|---|
| Symbol | |
|---|
| ID | 6485926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 2910401 |
|---|
| End bp | 2911075 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642738297 |
|---|
| Product | transcriptional regulator TctD |
|---|
| Protein accession | YP_002042026 |
|---|
| Protein GI | 194444892 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 0.510212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTCT TATTGGCGGA AGATAACCGT GAGCTGGCTC ACTGGCTGGA GAAAGCGCTG
GTGCAAAACG GCTTTGCCGT GGACTGCGTA TTTGACGGCC TGGCGGCTGA CCATCTTCTG
CACAGTGAAA TGTACGCGCT GGCGGTGCTG GATATCAATA TGCCGGGAAT GGATGGACTG
GAGGTGGTGC AACGGCTGCG TAAACGCGGT CAGACCTTGC CCGTTTTGCT GCTCACGGCG
CGAAGCGCGG TGGCGGATCG CGTAAAAGGT CTCAACGTCG GCGCGGATGA CTATCTGCCG
AAACCCTTTG AACTGGAAGA GCTGGATGCC CGTTTACGGG CCTTGCTGCG ACGCAGCGCT
GGGCAGGTTC ATGAAGTTCA GCAACTGGGG GAATTGATCT TTCATGATGA AGGGTATTTT
CTGTTACAGG GGCAGCCGTT AGCGCTGACG CCGCGTGAGC AGGCGCTCTT AACCGTATTG
ATGTACCGAC GAACGCGGCC GGTCTCGCGT CAGCAGCTTT TTGAACAGGT GTTCAGCCTG
AACGATGAGG TAAGCCCTGA AAGCATCGAA CTTTATATTC ATCGACTGCG TAAAAAACTC
CAGGGAAGCG ATGTACGAAT TACGACGCTG CGCGGCCTGG GTTATGTGCT GGAGCGCGGC
GATGAAGTGG GTTAA
|
|---|
| Protein sequence | MRLLLAEDNR ELAHWLEKAL VQNGFAVDCV FDGLAADHLL HSEMYALAVL DINMPGMDGL
EVVQRLRKRG QTLPVLLLTA RSAVADRVKG LNVGADDYLP KPFELEELDA RLRALLRRSA
GQVHEVQQLG ELIFHDEGYF LLQGQPLALT PREQALLTVL MYRRTRPVSR QQLFEQVFSL
NDEVSPESIE LYIHRLRKKL QGSDVRITTL RGLGYVLERG DEVG
|
|---|
| |