Gene LGAS_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0710 
Symbol 
ID4440097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp691780 
End bp692445 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content37% 
IMG OID639672567 
ProductDNA-binding response regulator 
Protein accessionYP_814540 
Protein GI116629368 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00420398 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones116 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TACTGGCAGA AGATGAAGAG CAACTGTCCC GTGTTTTGGT AGCGGCGATG 
CAAAGCGTTA ATTACGATGT CGACGCTGTT TTTAATGGCC GGGATGCTGT AGAACTTGCT
AAAAAGAATT CATATGATGT TATTATCCTA GATATCATGA TGCCGATTAT GGATGGAATC
ACCGCCTTGA AACAAATTCG AAAAAGCGGC GATAAGACTT ATGTATTAAT GCTTACTGCA
AAAGCAGAAA TTGATGATCG TGTAACTGGT TTAGATAGTG GAGCAGATGA TTACTTAACT
AAGCCTTTTT CATTAAAAGA GTTACTCGCT CGTTTACGGT CAAAGGAAAG ACGGGATGAT
CAATATACTC CTAATGAAGT TGAAGTTGGT GATCTGGCCT TGAATGTATC TGAGCAAGAG
CTAGTAAGTC ATAATTCAAT TCGCTTAGGA AGTAAAGAAA CGCAACTTTT AAACTATCTG
ATGCTCAATG AAGGTAAAGA GTTTTCAACT TCAGACTTAT TAGCGCATGT TTGGAAAGAT
GAAGACGATG CTAATGAAGA GGTAGTTTGG ATTTATATTT CCTATTTAAG ACAAAAACTC
CAATCTATTC AAAGCTCAGT CCAGATTGTA GGTGAAAAGG GCGGTAGTTT TTCATTAATT
AGGTAG
 
Protein sequence
MKILLAEDEE QLSRVLVAAM QSVNYDVDAV FNGRDAVELA KKNSYDVIIL DIMMPIMDGI 
TALKQIRKSG DKTYVLMLTA KAEIDDRVTG LDSGADDYLT KPFSLKELLA RLRSKERRDD
QYTPNEVEVG DLALNVSEQE LVSHNSIRLG SKETQLLNYL MLNEGKEFST SDLLAHVWKD
EDDANEEVVW IYISYLRQKL QSIQSSVQIV GEKGGSFSLI R