Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0710 |
Symbol | |
ID | 4440097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 691780 |
End bp | 692445 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639672567 |
Product | DNA-binding response regulator |
Protein accession | YP_814540 |
Protein GI | 116629368 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00420398 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 116 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT TACTGGCAGA AGATGAAGAG CAACTGTCCC GTGTTTTGGT AGCGGCGATG CAAAGCGTTA ATTACGATGT CGACGCTGTT TTTAATGGCC GGGATGCTGT AGAACTTGCT AAAAAGAATT CATATGATGT TATTATCCTA GATATCATGA TGCCGATTAT GGATGGAATC ACCGCCTTGA AACAAATTCG AAAAAGCGGC GATAAGACTT ATGTATTAAT GCTTACTGCA AAAGCAGAAA TTGATGATCG TGTAACTGGT TTAGATAGTG GAGCAGATGA TTACTTAACT AAGCCTTTTT CATTAAAAGA GTTACTCGCT CGTTTACGGT CAAAGGAAAG ACGGGATGAT CAATATACTC CTAATGAAGT TGAAGTTGGT GATCTGGCCT TGAATGTATC TGAGCAAGAG CTAGTAAGTC ATAATTCAAT TCGCTTAGGA AGTAAAGAAA CGCAACTTTT AAACTATCTG ATGCTCAATG AAGGTAAAGA GTTTTCAACT TCAGACTTAT TAGCGCATGT TTGGAAAGAT GAAGACGATG CTAATGAAGA GGTAGTTTGG ATTTATATTT CCTATTTAAG ACAAAAACTC CAATCTATTC AAAGCTCAGT CCAGATTGTA GGTGAAAAGG GCGGTAGTTT TTCATTAATT AGGTAG
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Protein sequence | MKILLAEDEE QLSRVLVAAM QSVNYDVDAV FNGRDAVELA KKNSYDVIIL DIMMPIMDGI TALKQIRKSG DKTYVLMLTA KAEIDDRVTG LDSGADDYLT KPFSLKELLA RLRSKERRDD QYTPNEVEVG DLALNVSEQE LVSHNSIRLG SKETQLLNYL MLNEGKEFST SDLLAHVWKD EDDANEEVVW IYISYLRQKL QSIQSSVQIV GEKGGSFSLI R
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