| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2301 |
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| Symbol | |
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| ID | 7259270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2485502 |
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| End bp | 2486179 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643562188 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002458768 |
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| Protein GI | 219668333 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000205811 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATTAT TATTAGCAGA GGATGAACTG GAACTGGCCA ATGCTTTAAC AGCCATTCTC
AAACACAACA ATTATTCTGT GGATGCGGTA GATAATGGGG CTGATGCTCT GGATTGGGCT
TTGGCCGGGA ACTATGACGG CATCCTTCTG GATATCATGA TGCCGAAGAT GAATGGTCTG
GAGGTTCTCG CCAAGCTGCG GGAAAAAGGA ATTTCCACCC CAATCTTAAT GCTCACAGCT
AAAGGGGAGA TCGAGGACCG GATTGAAGGT TTGGATCATG GGGCAGATGA TTACCTGACC
AAGCCTTTTG CCATGGGGGA ACTTTTAGCG CGGATTCGGG CCATCACCCG GCGCAAGACG
GAATTTGCCC CCAATCTTCT CACCGTAGGC AATTTGCAGT TGGATCGGGC AAACTATGAA
TTATCCGGTG AGAAAGGTTC CATACGGTTA GGCAACAAAG AGTATCAGAT GATGGAGATG
ATGATGAGCA GCCCCAACCG GCTGATCTCC ACGGAACAGT TTATGGAACG AATCTGGGGC
TATGATGCGG AAGCGGAAAT CAATGTGGTA TGGGTCTATA TATCCTATCT GCGCAAAAAA
CTGACTGCCT TAGGATCCAC TGTAACGATT AAAGCCTCCC GCGGTTTAGG GTATACCTTG
GAGGACAGTC ATGGTTAA
|
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| Protein sequence | MRLLLAEDEL ELANALTAIL KHNNYSVDAV DNGADALDWA LAGNYDGILL DIMMPKMNGL
EVLAKLREKG ISTPILMLTA KGEIEDRIEG LDHGADDYLT KPFAMGELLA RIRAITRRKT
EFAPNLLTVG NLQLDRANYE LSGEKGSIRL GNKEYQMMEM MMSSPNRLIS TEQFMERIWG
YDAEAEINVV WVYISYLRKK LTALGSTVTI KASRGLGYTL EDSHG
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