| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1236 |
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| Symbol | |
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| ID | 8414115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1388712 |
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| End bp | 1389386 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022829 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003180253 |
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| Protein GI | 257785036 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.532106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAGTGC TTCTAGCTGA AGATGAGAAG AGAATGGCTG CAGCTATTGT GGCTCTCTTG
AAGCAAGAAA AATACGACGT TGATCATATG ACTGACGGCG CGTCTGCCCT TCTCGCCCTA
GAAAGTAATA TGTATGACAT TGCAATCCTG GATGTTATGA TGCCTAAGAT GAGTGGGTTT
GAGGTTTCCA GAAAGGCACG TAGTAAGGGA ATTACCATTC CTATTTTAAT GCTGACGGCA
AAAAGCCAGC TAGACGATAA GGTCGAGGGC CTGGATAACG GCGCTGACGA CTATCTAACC
AAGCCTTTCC AGACGGCAGA ACTCTTAGCT CGTTTACGTG CGCTAGGAAG AAGGAGTTCT
AGCTTTCAAG AGAATGTCCT GTGTTTTGGC GACCTCTCGC TTGATTCCAC AACCGCAACG
TTGACCTGTG AGACTTCTGG CCAGAGTGTG CGTCTAAGCG AGAAAGAGTT GCGCATTCTT
GAGTATATGA TTGGCAATCA TGGTCGCATT ATGACGCGTG ATCAGCTTGC CATTAAGATT
TGGGGATTTG AAAGCGACGC CGAGTACAAC AACGTTGAGG TGTACATGTC ATTTACCCGT
AAAAAACTGG CATTTATCGG TTCTACGGTA GAGATTAAAG CAGTTCGCGG CTTGGGATAT
GAATTGAGGG ATTAA
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| Protein sequence | MRVLLAEDEK RMAAAIVALL KQEKYDVDHM TDGASALLAL ESNMYDIAIL DVMMPKMSGF
EVSRKARSKG ITIPILMLTA KSQLDDKVEG LDNGADDYLT KPFQTAELLA RLRALGRRSS
SFQENVLCFG DLSLDSTTAT LTCETSGQSV RLSEKELRIL EYMIGNHGRI MTRDQLAIKI
WGFESDAEYN NVEVYMSFTR KKLAFIGSTV EIKAVRGLGY ELRD
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