37 homologs were found in PanDaTox collection
for query gene Sama_2495 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008700  Sama_2495  response regulator receiver protein  100 
 
 		 163 aa  327  6e-89  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_3890  transcriptional regulator, LuxR family protein  38.51 
 
 		 174 aa  123  1e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_4063  LuxR family transcriptional regulator  40.37 
 
 		 181 aa  122  2e-27  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1945  hypothetical protein  42.36 
 
 		 163 aa  122  3e-27  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3855  LuxR family transcriptional regulator  40.37 
 
 		 181 aa  122  3e-27  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_4438  LuxR family transcriptional regulator  39.75 
 
 		 181 aa  120  6e-27  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_0102  response regulator receiver protein  39.75 
 
 		 175 aa  120  6e-27  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_3948  LuxR family transcriptional regulator  39.75 
 
 		 181 aa  120  6e-27  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4298  response regulator receiver protein  39.75 
 
 		 181 aa  120  6e-27  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3763  LuxR family transcriptional regulator  38.04 
 
 		 176 aa  120  7e-27  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.415447 
 
 
-
 
NC_011663  Sbal223_4243  transcriptional regulator, LuxR family  39.75 
 
 		 181 aa  120  9.999999999999999e-27  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_00101  transcriptional regulator, LuxR family protein  36.65 
 
 		 169 aa  113  1.0000000000000001e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3851  transcriptional regulator, LuxR family  38.65 
 
 		 206 aa  93.2  1e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.321989  n/a   
 
 
-
 
NC_011891  A2cp1_3937  transcriptional regulator, LuxR family  38.65 
 
 		 206 aa  92.4  2e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.59446  n/a   
 
 
-
 
NC_013440  Hoch_1339  transcriptional regulator, LuxR family  35.26 
 
 		 188 aa  92.4  3e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.919185 
 
 
-
 
NC_007760  Adeh_3794  LuxR family transcriptional regulator  37.27 
 
 		 179 aa  91.3  5e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3443  LuxR family transcriptional regulator  57.53 
 
 		 154 aa  88.6  3e-17  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_3914  response regulator receiver protein  40.99 
 
 		 208 aa  87  1e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0257494  normal  0.794446 
 
 
-
 
NC_009952  Dshi_1034  transcriptional regulator  38.3 
 
 		 180 aa  75.1  0.0000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130268  normal  0.442901 
 
 
-
 
NC_010682  Rpic_1748  transcriptional regulator, LuxR family  34.92 
 
 		 146 aa  68.9  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  0.747406  normal  0.455372 
 
 
-
 
NC_013512  Sdel_0795  regulatory protein LuxR  46.94 
 
 		 202 aa  46.2  0.0002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.0000492678  n/a   
 
 
-
 
NC_008825  Mpe_A2536  two component regulator  46.25 
 
 		 204 aa  43.9  0.001  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.378867 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  42.11 
 
 		 213 aa  43.1  0.001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008043  TM1040_3227  LuxR family transcriptional regulator  42.86 
 
 		 545 aa  43.5  0.001  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_4059  two component LuxR family transcriptional regulator  30.3 
 
 		 212 aa  42.7  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  0.111025  normal  1 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  35.14 
 
 		 219 aa  42.4  0.003  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_009483  Gura_3333  putative GAF sensor protein  35.71 
 
 		 337 aa  42.4  0.003  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000024047  n/a   
 
 
-
 
NC_008392  Bamb_6466  LuxR family transcriptional regulator  38.33 
 
 		 284 aa  42.4  0.003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4031  ATP-dependent transcription regulator LuxR  31.48 
 
 		 896 aa  41.2  0.006  Shewanella woodyi ATCC 51908  Bacteria  normal  0.924331  normal  0.36139 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  33.78 
 
 		 220 aa  41.2  0.006  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  33.78 
 
 		 220 aa  41.2  0.006  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  33.78 
 
 		 220 aa  41.2  0.006  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_010002  Daci_2336  LuxR family transcriptional regulator  44.44 
 
 		 322 aa  40.8  0.008  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.671494 
 
 
-
 
NC_012669  Bcav_1611  two component transcriptional regulator, LuxR family  38.18 
 
 		 208 aa  40.8  0.009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.548364  normal  1 
 
 
-
 
NC_013947  Snas_3529  transcriptional regulator, LuxR family  42.11 
 
 		 324 aa  40.8  0.009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0854004  normal  1 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  33.78 
 
 		 219 aa  40.4  0.01  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_012853  Rleg_5743  two component transcriptional regulator, LuxR family  38.27 
 
 		 212 aa  40.4  0.01  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>