| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3763 |
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| Symbol | |
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| ID | 4920755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4481475 |
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| End bp | 4482005 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165389 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001095888 |
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| Protein GI | 127514691 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.415447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG ATCTGGTTAT CATCGCCCTC TTGGTGCTTA TCATGTTGTT TAAGCTGGTG
GATATTGTCG CCGACGTGCA ACTGGAGATC CCCGCCTGGC ATATCGCCCA GGAGAGTGTC
TTGGTGCTGC TGACCGTGAT CGCCACCCTC TACCTGAGCC GCGACCTAAT GCGTCGCTCC
CGTCAGGTCA AGGCTCTGGC CCACAGGCTC GCCCAAGCCG ATAAGCAGAT AGATAACCTA
TCGACTCAGA TGCGCGCCGC CCGCCAGGAG TATAGCCAGG CGGTGGCCAG CCAGTTCGAT
ACCTGGGGCT TCACCAAGAG CGAGCAGCAG GTGGCGTTTT TGATCCTCAA GGGGCTCAGC
TTTAAGGAGA TCGCCGAGGT GCGCCAGACC AAGGAGAAGA CGGTGCGCCA GCAGGCCTCC
ACCATCTATG GTAAGGCCGA GGTGGATGGC CGCCACACCT TCTGCGCCTG GTTTATGGAA
GACTTCATTC AAGATCATAA CCAGGAGCTA GCCAACAACG AGGCGGCCTA G
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| Protein sequence | MKKDLVIIAL LVLIMLFKLV DIVADVQLEI PAWHIAQESV LVLLTVIATL YLSRDLMRRS
RQVKALAHRL AQADKQIDNL STQMRAARQE YSQAVASQFD TWGFTKSEQQ VAFLILKGLS
FKEIAEVRQT KEKTVRQQAS TIYGKAEVDG RHTFCAWFME DFIQDHNQEL ANNEAA
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