25 homologs were found in PanDaTox collection
for query gene Shew_3763 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_3763  LuxR family transcriptional regulator  100 
 
 		 176 aa  358  3e-98  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.415447 
 
 
-
 
NC_009997  Sbal195_4438  LuxR family transcriptional regulator  80.46 
 
 		 181 aa  296  1e-79  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4298  response regulator receiver protein  80.46 
 
 		 181 aa  295  2e-79  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0102  response regulator receiver protein  80.46 
 
 		 175 aa  295  3e-79  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3855  LuxR family transcriptional regulator  79.19 
 
 		 181 aa  294  5e-79  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3948  LuxR family transcriptional regulator  78.61 
 
 		 181 aa  293  9e-79  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_4063  LuxR family transcriptional regulator  79.19 
 
 		 181 aa  293  9e-79  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_4243  transcriptional regulator, LuxR family  79.89 
 
 		 181 aa  291  2e-78  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_3890  transcriptional regulator, LuxR family protein  75.44 
 
 		 174 aa  274  5e-73  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1945  hypothetical protein  51.75 
 
 		 163 aa  163  9e-40  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_00101  transcriptional regulator, LuxR family protein  42.17 
 
 		 169 aa  151  4e-36  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_2495  response regulator receiver protein  38.04 
 
 		 163 aa  120  8e-27  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_3794  LuxR family transcriptional regulator  34.97 
 
 		 179 aa  98.6  4e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3937  transcriptional regulator, LuxR family  34.36 
 
 		 206 aa  96.3  2e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.59446  n/a   
 
 
-
 
NC_011145  AnaeK_3851  transcriptional regulator, LuxR family  34.36 
 
 		 206 aa  96.7  2e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.321989  n/a   
 
 
-
 
NC_003910  CPS_3443  LuxR family transcriptional regulator  37.5 
 
 		 154 aa  87.8  7e-17  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_1339  transcriptional regulator, LuxR family  30.49 
 
 		 188 aa  80.9  0.000000000000008  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.919185 
 
 
-
 
NC_009675  Anae109_3914  response regulator receiver protein  34.5 
 
 		 208 aa  80.9  0.000000000000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0257494  normal  0.794446 
 
 
-
 
NC_009952  Dshi_1034  transcriptional regulator  29.76 
 
 		 180 aa  66.6  0.0000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130268  normal  0.442901 
 
 
-
 
NC_010682  Rpic_1748  transcriptional regulator, LuxR family  30.58 
 
 		 146 aa  58.9  0.00000003  Ralstonia pickettii 12J  Bacteria  normal  0.747406  normal  0.455372 
 
 
-
 
NC_009832  Spro_4193  LuxR family transcriptional regulator  29.59 
 
 		 229 aa  44.3  0.001  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  30.82 
 
 		 217 aa  43.1  0.002  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_012669  Bcav_2188  two component transcriptional regulator, LuxR family  45.65 
 
 		 220 aa  42.7  0.002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.546074  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  24.63 
 
 		 211 aa  41.2  0.008  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_3095  regulatory protein LuxR  33.33 
 
 		 386 aa  40.8  0.01  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
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