Gene Sama_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2495 
Symbol 
ID4604742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2996364 
End bp2996855 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content52% 
IMG OID639781890 
Productresponse regulator receiver protein 
Protein accessionYP_928367 
Protein GI119775627 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCGGG ACACTATTAC CCTAGTCGTG CTGTTACTCG TAATTATTGC CAGCGGCAGC 
GATATTTATA TGGACCTGCG CCAGGGAGCA TCCATGATGC ACCTGATTGA GGAAGCCATT
GTTTTAGGCC TCGCGACCCT GCTGCTAAGC TGGTTTTCAC TGAACTACAA ACGCCAGAAG
CGCCAGATAC AGGAATTGAC CCAGGAATTA CTGGACGCCC GTAATCAGGC TCTGCCCGCG
GATGCGGCGC TGCTCGAAGC CCGTCATCGT CTCGCTGATG TCATGGCCGT TCAGTTTGAA
GCCTGGGAGC TGTCGCCCAG CGAAAAAGAA GTGGGCATGC TGCTGCTTAA AGGATTGTCG
TTAAAAGAGA TTGCCCTGCT GAGGGGCACC GCTGAAAAAA CCATTCGCCA ACAGGCATCT
TCCATCTATA AAAAAGCTGG CGTTGTCGGC AGACACGGAT TTGCAGCCTG GTTTATTGAA
GACTTCCTCT GA
 
Protein sequence
MNRDTITLVV LLLVIIASGS DIYMDLRQGA SMMHLIEEAI VLGLATLLLS WFSLNYKRQK 
RQIQELTQEL LDARNQALPA DAALLEARHR LADVMAVQFE AWELSPSEKE VGMLLLKGLS
LKEIALLRGT AEKTIRQQAS SIYKKAGVVG RHGFAAWFIE DFL