Gene Spro_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4193 
Symbol 
ID5604968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4647167 
End bp4647856 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID640939753 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001480415 
Protein GI157372426 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCGT CCGATAAAAA TAATGAATTT TATTTGAAAG GTCTGATTGC CATGATGGAG 
CACTTAAGTG AGCCATGGGG CATTAAGGAT CTGGCATCCC GTCATATTTA TATGAACCAT
GCCGCCTACC TCTATACCAA TACGCCGCTT GATTTTGATG TAGCCGGTAA GCTGGACGAC
GAGTTTCCCG CCGACTGGGC CGAATGCGCG GCTGATTTTG TCGAACATGA CAAAATGACA
GAGGTCTCGC GGGAGCGGGT TGCGGTGATA GAAACGCATT ATTGGTACGG GAAAGACAGT
CTGACCCCGT TTATCAGCGA AAAACTGCCG ATCTACAACG ATAAAAAAGA AGTGGTTGGG
GTGATGTGGA ACGCCAAACC GCTCAACACC TTATCTCCGC TGAAATTTAT CAATCAACAA
AAACCCAGCG TTCTGACCAC AGAAACCAAT AGCACTATTT TCACCCGAGC CGAACTTGAC
GTGATATTTT TAATGTTGCA ACGGCTGTCG GTGAAAGAGA TCGCCAAAAT ATACAATATC
AGCAATAAAA CCATAGAAAA CAGAATATAT AACATCTATC AAAAATCTGA CGTCCATACA
CAGCAGCAGT TTGAAGAATT TTGCAAATAT GCGCATCTGG ACAATTACAT TCCCGATCGC
CTGATAGCTA AAGGCATTCA GTTTATTTAA
 
Protein sequence
MDSSDKNNEF YLKGLIAMME HLSEPWGIKD LASRHIYMNH AAYLYTNTPL DFDVAGKLDD 
EFPADWAECA ADFVEHDKMT EVSRERVAVI ETHYWYGKDS LTPFISEKLP IYNDKKEVVG
VMWNAKPLNT LSPLKFINQQ KPSVLTTETN STIFTRAELD VIFLMLQRLS VKEIAKIYNI
SNKTIENRIY NIYQKSDVHT QQQFEEFCKY AHLDNYIPDR LIAKGIQFI