28 homologs were found in PanDaTox collection
for query gene Rpic_1748 on replicon NC_010682
Organism: Ralstonia pickettii 12J



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010682  Rpic_1748  transcriptional regulator, LuxR family  100 
 
 		 146 aa  303  5.0000000000000004e-82  Ralstonia pickettii 12J  Bacteria  normal  0.747406  normal  0.455372 
 
 
-
 
NC_003910  CPS_3443  LuxR family transcriptional regulator  50 
 
 		 154 aa  76.6  0.00000000000009  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_1339  transcriptional regulator, LuxR family  44.74 
 
 		 188 aa  70.5  0.000000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.919185 
 
 
-
 
NC_003910  CPS_1945  hypothetical protein  32.8 
 
 		 163 aa  69.3  0.00000000001  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_2495  response regulator receiver protein  34.92 
 
 		 163 aa  68.9  0.00000000002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_00101  transcriptional regulator, LuxR family protein  36 
 
 		 169 aa  66.6  0.0000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_4243  transcriptional regulator, LuxR family  40.51 
 
 		 181 aa  64.3  0.0000000005  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3855  LuxR family transcriptional regulator  37.97 
 
 		 181 aa  62  0.000000003  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3948  LuxR family transcriptional regulator  37.97 
 
 		 181 aa  61.6  0.000000004  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_0102  response regulator receiver protein  39.24 
 
 		 175 aa  61.2  0.000000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_4298  response regulator receiver protein  39.24 
 
 		 181 aa  61.6  0.000000004  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4438  LuxR family transcriptional regulator  39.24 
 
 		 181 aa  61.6  0.000000004  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_3890  transcriptional regulator, LuxR family protein  41.18 
 
 		 174 aa  60.5  0.000000008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_4063  LuxR family transcriptional regulator  37.97 
 
 		 181 aa  60.1  0.000000009  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_3914  response regulator receiver protein  39.76 
 
 		 208 aa  59.7  0.00000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0257494  normal  0.794446 
 
 
-
 
NC_009092  Shew_3763  LuxR family transcriptional regulator  30.58 
 
 		 176 aa  58.9  0.00000002  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.415447 
 
 
-
 
NC_011145  AnaeK_3851  transcriptional regulator, LuxR family  34.38 
 
 		 206 aa  58.2  0.00000004  Anaeromyxobacter sp. K  Bacteria  normal  0.321989  n/a   
 
 
-
 
NC_007760  Adeh_3794  LuxR family transcriptional regulator  42.42 
 
 		 179 aa  56.2  0.0000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3937  transcriptional regulator, LuxR family  34.38 
 
 		 206 aa  56.2  0.0000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.59446  n/a   
 
 
-
 
NC_009952  Dshi_1034  transcriptional regulator  37.14 
 
 		 180 aa  54.3  0.0000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.130268  normal  0.442901 
 
 
-
 
NC_007510  Bcep18194_A5497  LuxR family transcriptional regulator  38.33 
 
 		 395 aa  43.1  0.001  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_1817  LuxR response regulator receiver  40 
 
 		 236 aa  42.4  0.002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  27.37 
 
 		 211 aa  41.2  0.005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  34.85 
 
 		 217 aa  41.2  0.005  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007347  Reut_A1529  LuxR family transcriptional regulator  43.18 
 
 		 383 aa  40.4  0.007  Ralstonia eutropha JMP134  Bacteria  normal  0.824388  n/a   
 
 
-
 
NC_002936  DET1531  LuxR family DNA-binding response regulator  35.85 
 
 		 219 aa  40.4  0.008  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000956559  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  38.18 
 
 		 216 aa  40.4  0.009  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  30.14 
 
 		 221 aa  40  0.01  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>