| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1945 |
|---|
| Symbol | |
|---|
| ID | 3518969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 2009323 |
|---|
| End bp | 2009814 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637284407 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_268675 |
|---|
| Protein GI | 71278440 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA AAGTTATACT GTTGGTTTTG ATAATAATAA TGTTATTAAA TTTTTCTGAT
GTGATCACCG ATATATCGTT AGGCGTACCC AATTGGCATA TTGTCTCTGA AAGCCTCATT
GTTCTTGTTT CAGGTTTTGG TGCACTGTTT TTAATAAGGG ATATGCGTGC TCGAACATTA
AATACTATTC GATTAAAACA AGAGTTAGTA TTTTCAGATA ATAAATTGAG AGATATCTCT
GAAGAGATGA GAAGCGCTCG TCATGAATAT AGCAATGTTA TTCATACACA GTTTGAACAA
TGGGTCTTAA CGCCTAGTGA GCAAGACGTT GCCATGTTAT TACTGAAGGG ACTCAGTTTT
AAAGAAATAA GTGGCGTTAG GAATACCAAA GAAAAGACGG TTAGACAACA AGCCTCTGTT
ATCTATAGTA AAGCAAATGT AGAAGGGCGA CATGAGTTTG CTGCATGGTT TTTAGAAGAC
TTTATGGGCT AG
|
|---|
| Protein sequence | MKDKVILLVL IIIMLLNFSD VITDISLGVP NWHIVSESLI VLVSGFGALF LIRDMRARTL
NTIRLKQELV FSDNKLRDIS EEMRSARHEY SNVIHTQFEQ WVLTPSEQDV AMLLLKGLSF
KEISGVRNTK EKTVRQQASV IYSKANVEGR HEFAAWFLED FMG
|
|---|
| |