Gene Shew185_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4298 
Symbol 
ID5370369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5129042 
End bp5129587 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID640832561 
Productresponse regulator receiver protein 
Protein accessionYP_001368475 
Protein GI153002794 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATC TTGTCATTAT TGGTCTGTTG GCCTTGATCA TATGCTTTAA GCTTTTTGAC 
ATCTCATCCG ACATTCAATT AGGCATTCCC CAATGGCATA TTGCTCAGGA AGCCATGTTA
TTAGTGCTCA CTGTGATTGG TGCCATGTAC TTAAGTTATG ACCTTATTCG TCGCTCCCGC
GAAGTGAAAG CGTTGGCTAA ACGGTTGGAG CATGCGGATA AGAAAATCGA CAATATGTCG
ACGCAAATGC GCTCTGCCAG ACAAGAATAC AGCCAAGCGG TGTCGCAGCA ATTCGAGACT
TGGGGCTTTA CTAAGAGTGA GCAGCAAGTG GCTTTTTTAT TACTTAAGGG CCTAAGCTTT
AAAGAAATTG CCGAAGTGCG CCAGACTAAA GAAAAAACCG TCAGACAACA GGCATCGACC
ATTTACGGTA AAGCGGCAGT CGATGGACGC CATACTTTTT GCGCTTGGTT TATGGAAGAT
TTTATTCAAG AACATAATCA AGATCTTGCT GCGAATGAAG CGGCATCAAG CCCTAAGGCA
GCTTAA
 
Protein sequence
MKDLVIIGLL ALIICFKLFD ISSDIQLGIP QWHIAQEAML LVLTVIGAMY LSYDLIRRSR 
EVKALAKRLE HADKKIDNMS TQMRSARQEY SQAVSQQFET WGFTKSEQQV AFLLLKGLSF
KEIAEVRQTK EKTVRQQAST IYGKAAVDGR HTFCAWFMED FIQEHNQDLA ANEAASSPKA
A