| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4031 |
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| Symbol | |
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| ID | 6118381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4904610 |
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| End bp | 4907300 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635592 |
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| Product | ATP-dependent transcription regulator LuxR |
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| Protein accession | YP_001762382 |
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| Protein GI | 170728356 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.924331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.36139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAAAAA AACCAACGCC AAGCTTTCTG CTACAAAAAT TCAAGCCACC TCAGCAACAG
GTAAAACTGT CACAGAGAAC CCGGCTACTG AAGCTGCTTA GCCAAGCAGA AGCAAAGAGC
TTGATCACGG CTGTCAGCCC AGCAGGTTAT GGCAAATCAA CCTTGCTCTC TCAATATGTA
GAGATGCTGA ACCAGCAAGG TAATGCTCAG GTGATCTGGA TTGCTATCGA CCCATCTGAC
AATGAGCCTA ATAAGTTTTT CAACATTTTC TCTCATGCAT TGGTTCACCA CAATATCGCC
GATAAACAGC TAATAAACCG ATCAAATAGC ATCTCGGCTA ATACAGATTA CGACTCTTTT
TTTATCGATA TTGTGGGTAT TCTTCATGAG GTTAAGCACC CTATTTATCT CTTTATTGAC
GATTTTCATT TTCTGTCTGA TAAGGTGATC TTGCATTTTT TCAATCAAAT TTTGCAGTAT
GCTCCTCAAC AACTTCAGCT GATCATTTCC AGCCGGATCC AACCCAGATT AGAGATAGCT
AACCTCTTGG CCAGTGGGCA GATGCAGATG CTTCAGCCGG AACATTTTAA ACTCAGTATT
GATGAAGCTT TTCAGCTCTA CTCAGATCAA TTTAGCCAAA GTGAAATCAC CGCTTTTCAT
GATAAGACAG AGGGGTGGGT CGTTGCTATG CAGCTTATAG CCATCTTTCA TCAGCAGCAC
CCAGAACTGG CTTTGACCAG CCTGCTCAAC CAATCAATCG ATATTCTCGA CCTCTATATG
TCAGAGCAGA TCTACCACAA GCTTGATGCC AATGTTCAGC ACTTTCTACT GCATACTTCA
CTGCTGGATA GGTTTGACCC TCTTATTGCC AATTATGTCT GTGAGATAGA TAACTCAACC
CAATTAATGT CACAGATCAT CCCCTTTAGC TCTTTAGTTA TCCCCATCGA CAGCCAACAA
GGCTTTTTTC GCTATCACCA TCTATTTGCT GATTTTTTGA AACAGAGACT ATTACAGGAG
GTGGGAGAGC AAACATGCAG AGAACTAAGA TGCAAAGCAG CTAAATATTA CGCCAATAAT
GACTACTTTG AAGAAGCTGT TAACCAATAT ATTCGCGCTA ACCATATTGA ATCGGCTATT
GCACTTATAG CGTCAGCGGG GGGATGGGAG CTAATTTTAA CACGAGGAAT TGGCTATGTA
GAATCACTCT TAAGTCAGTT TAATCGCACC CAGATCACCA ACTCGCCAAC TCTCGGTCTC
ATTCAATGCT ACCTATATTT GAAACTGGGT GAGGTGAATC AAGCGTCAAA CTCCTATGAG
CTCGCCTACA CCCTTTTCAA GGAGTACCAA CAGCAAGATA AACCCAGCTC AAGCCGGTCT
CGCGATTTTA GTATTATCAA GATGCTTATC GATCTCTATC TAGACAGAGG TACCGACAAT
CGGCTGATTA ATACATTAAC CGAACTGCTC GAAACTCTTG AAGAGAGTGA CCATTTAGGT
CGTGGGGTGG TTTTGGCAGG CCTTGGGCTT ATTCATAACC AACTAGGACG ATTTGAAGAG
GCGCATTCTG CAGCCTTGAC CAGCCACCAA CAGATGCAAC TGGCTAATTG TTGGGTAGGG
ATTAATTATA ATATCTTCCA TCAAGGACAA AGCCTTGCTT ACCGTGGAAG GCTAAACGAA
GCACTTGAGC TGTTTAAACG TGCGAGTAAA ATGGCAAAAG AGCACCTTGG TTTAGATAGT
GGGCTACAAT CCATGGCAAG CTGTCTCAAA GCCGATATCC ACTACCAAGT CTACCAGATA
GAGAAGGCTG AGGAGTTGCT CGCCAGTGGC ATTAAGGTAT TAGAAAGTAA AGACTGTTGG
CATGATATTT ATGCGGTAAG CTTCAAGTTA GCCATCAATA TTGCCATTGC TCGTGATGAT
CACAACCTAT GCCAACATTA CTTACAAAGG GGTTATCTGG TCGCCCAAAT AAGGCAGTTA
GAGAGACTTG AAAAACTCCT TGATGTACTT AGCCTAAAGG TCACAGATAA GTTTTGTCAT
CTAGACAAAT TTAACCAACT AAACAGTCAG ATAATTCGTG AAAACTATTG GGAAACTCCT
CAACCTATGT GGTTTGTGAT AAGCGAGTAT TACTATGTCA TCGCTAACCA CTATTTATCA
CGTAATATGA GTAATCAAGC ACTCAGTTAT AGCCAGAAAC TCAGCCTACT AGCCCTAGAG
AACAACCAAA AAATCGATCA AGTTAAAGCC TTGGGCATTC AATGCTTATC CCAGTTTTCA
ACCGGTAATG AGAAAAAAGC ATTTAGATTA GTGACTCAGA TGTTAGAACT TGCCAGCCAA
GTTGGTTGTA AACAGGTGTT TTTTGAGCTT CCTAATCACA TTGAAGCCCT ATTACTTAAG
CTGAACCTTC ATAGCGACGA AAACCAACTT AGTAGTGAGG GAAACAGGCT ACTTACTTGG
TTAATCTCAG AGCTAAAAAA GTCACATCAA GCTCAAAATA ACCCTTGGCA CCTCTCCTCA
CGAGAACAAC AGATCTGCCC ACTACTCTCT CAAGGTTTCA CCAATAAACA GATCAGCACC
ACCTTGGGGA TCTCTGAAAA CACAGTAAAG TTTCATCTTA AAAATCTCTT TCAAAAATTA
GGAGTCATTA ACCGTCAACA AGCCGTACTC GCATTAGCGA CACCTAAATA G
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| Protein sequence | MPKKPTPSFL LQKFKPPQQQ VKLSQRTRLL KLLSQAEAKS LITAVSPAGY GKSTLLSQYV
EMLNQQGNAQ VIWIAIDPSD NEPNKFFNIF SHALVHHNIA DKQLINRSNS ISANTDYDSF
FIDIVGILHE VKHPIYLFID DFHFLSDKVI LHFFNQILQY APQQLQLIIS SRIQPRLEIA
NLLASGQMQM LQPEHFKLSI DEAFQLYSDQ FSQSEITAFH DKTEGWVVAM QLIAIFHQQH
PELALTSLLN QSIDILDLYM SEQIYHKLDA NVQHFLLHTS LLDRFDPLIA NYVCEIDNST
QLMSQIIPFS SLVIPIDSQQ GFFRYHHLFA DFLKQRLLQE VGEQTCRELR CKAAKYYANN
DYFEEAVNQY IRANHIESAI ALIASAGGWE LILTRGIGYV ESLLSQFNRT QITNSPTLGL
IQCYLYLKLG EVNQASNSYE LAYTLFKEYQ QQDKPSSSRS RDFSIIKMLI DLYLDRGTDN
RLINTLTELL ETLEESDHLG RGVVLAGLGL IHNQLGRFEE AHSAALTSHQ QMQLANCWVG
INYNIFHQGQ SLAYRGRLNE ALELFKRASK MAKEHLGLDS GLQSMASCLK ADIHYQVYQI
EKAEELLASG IKVLESKDCW HDIYAVSFKL AINIAIARDD HNLCQHYLQR GYLVAQIRQL
ERLEKLLDVL SLKVTDKFCH LDKFNQLNSQ IIRENYWETP QPMWFVISEY YYVIANHYLS
RNMSNQALSY SQKLSLLALE NNQKIDQVKA LGIQCLSQFS TGNEKKAFRL VTQMLELASQ
VGCKQVFFEL PNHIEALLLK LNLHSDENQL SSEGNRLLTW LISELKKSHQ AQNNPWHLSS
REQQICPLLS QGFTNKQIST TLGISENTVK FHLKNLFQKL GVINRQQAVL ALATPK
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