| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2336 |
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| Symbol | |
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| ID | 5747899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2575642 |
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| End bp | 2576610 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297418 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001563359 |
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| Protein GI | 160897777 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.671494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGCTG CATACAACCA CCTGCTGCTG AACCTCTACC GGCTATCGCA CGAACAGCCT
GTCGAGCATT TCCAGGACCA GGCGCTGGAC CTGCTCAAAC CCGTGCTGCC CTTCGACTCG
GCCATGTGGG GCTCGGCCAC CATGACGACG GCCGGCATCG ATATCCACAC CATCCACCTT
CACCTGCAGC CGCCCGAAAT GCTGCAGGCC TATGAAGAGG TCAAGCACCT GGACACGGCG
GCGCAGGCCA TCGCCAGGCA CCCCAGCGAG ACGCTGGCCT TCGAAGCGAG GACCTGGTTC
GGTGGCAGTC ACCAGGGGGC GCTGCGCGAC TACGGCAGGC GCTTTGAGCA GTCGCACTTC
TTCATCGGCG GGATGGTGAA CCCGGCCACT CTTTACACGC GCTGGCTCAC GCTGTTTCGC
GCCCGCACGG ATGCGCATTG CACCGAGGGC GAGCGCCAAC TGCTGGCCGC GCTGCTGCCC
CATGTGCAGC AGGCGCTGGA ACTCAACCGC CTCACGCATC TGGGGCAGCT TCGGCAGGGC
CTGGCCCGTG ATCCGTTGGG CTCGGCACTG GCAGACCCGC GCGGCATCAT CCACCACATG
GACGTCGTCT TCGAGCACGC CTTGCGCGCC GAATGGCCGG GCCGGCAAGG TCCTCGCCTG
CCTGCGGCCG TGCAGACAGC GGCACAGGGC GGCGCCCATC GTCTGGTGGC CCACACCCTG
GTCATCACGC TGTTCACGCA GCACGGCCTG CTGTGGTTGC GAGCGCGCCC CCGGTGCGCA
GCCGACGGGC TGTCCCCCCG CGAAGCCACG GTTGCCCGGC TTGTGGTCCG GGGCCTGACG
CACAAGCAGA TTGCAGTCCA GCTCCAGCGT GCTCCTGCCA CGGTGCGCAA CCAGATCCGC
TCCATCTACG AAAAGCTGGG CATTGCCAAC GTGGCGTCGC TTGCCGAGGC ACTCCGGCTG
ATGGATTGA
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| Protein sequence | MDAAYNHLLL NLYRLSHEQP VEHFQDQALD LLKPVLPFDS AMWGSATMTT AGIDIHTIHL
HLQPPEMLQA YEEVKHLDTA AQAIARHPSE TLAFEARTWF GGSHQGALRD YGRRFEQSHF
FIGGMVNPAT LYTRWLTLFR ARTDAHCTEG ERQLLAALLP HVQQALELNR LTHLGQLRQG
LARDPLGSAL ADPRGIIHHM DVVFEHALRA EWPGRQGPRL PAAVQTAAQG GAHRLVAHTL
VITLFTQHGL LWLRARPRCA ADGLSPREAT VARLVVRGLT HKQIAVQLQR APATVRNQIR
SIYEKLGIAN VASLAEALRL MD
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