More than 300 homologs were found in PanDaTox collection
for query gene Noca_2069 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_2069  binding-protein-dependent transport systems inner membrane component  100 
 
 
293 aa  559  1e-158  Nocardioides sp. JS614  Bacteria  normal  0.449402  n/a   
 
 
-
 
NC_009972  Haur_1235  binding-protein-dependent transport systems inner membrane component  38.58 
 
 
285 aa  169  5e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4232  binding-protein-dependent transport systems inner membrane component  42.17 
 
 
285 aa  163  4.0000000000000004e-39  Salinispora tropica CNB-440  Bacteria  normal  normal  0.519563 
 
 
-
 
NC_007519  Dde_0308  ABC transporter, permease protein, putative  38.93 
 
 
296 aa  146  3e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0305  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
665 aa  134  1.9999999999999998e-30  Desulfovibrio vulgaris DP4  Bacteria  normal  0.716574  normal 
 
 
-
 
NC_013173  Dbac_0790  binding-protein-dependent transport systems inner membrane component  36 
 
 
287 aa  130  2.0000000000000002e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.829525  n/a   
 
 
-
 
NC_011769  DvMF_2348  binding-protein-dependent transport systems inner membrane component  36.78 
 
 
303 aa  116  3.9999999999999997e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.710865 
 
 
-
 
NC_013223  Dret_2123  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
287 aa  115  1.0000000000000001e-24  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.500161 
 
 
-
 
NC_009050  Rsph17029_3638  binding-protein-dependent transport systems inner membrane component  32 
 
 
291 aa  94.7  2e-18  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.50975 
 
 
-
 
NC_011989  Avi_2179  ABC transporter membrane spanning protein  26.05 
 
 
284 aa  88.6  1e-16  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2750  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
313 aa  85.5  9e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.758022  n/a   
 
 
-
 
NC_007494  RSP_3517  ABC polyamine/opine transporter, inner membrane subunit  32.85 
 
 
282 aa  84  0.000000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2421  putative ABC spermidine/putrescine transporter permease protein  30.8 
 
 
291 aa  84  0.000000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3162  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
282 aa  84  0.000000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0280655 
 
 
-
 
NC_013757  Gobs_4969  molybdate ABC transporter, inner membrane subunit  33.89 
 
 
271 aa  83.2  0.000000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2914  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
278 aa  82  0.00000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5026  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
296 aa  80.9  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0515819  normal  0.562108 
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  29.22 
 
 
299 aa  80.5  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2769  ABC transporter permease protein  26.67 
 
 
580 aa  80.1  0.00000000000004  Psychromonas ingrahamii 37  Bacteria  normal  0.405226  normal  0.20244 
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
306 aa  79.7  0.00000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_010625  Bphy_6370  binding-protein-dependent transport systems inner membrane component  27.92 
 
 
318 aa  79.7  0.00000000000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3395  ABC opine/polyamine transporter, inner membrane subunit  32.08 
 
 
290 aa  78.2  0.0000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.445606  n/a   
 
 
-
 
NC_013946  Mrub_0150  binding-protein-dependent transport systems inner membrane component  29.65 
 
 
307 aa  77.4  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5637  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
318 aa  77.8  0.0000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3040  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
290 aa  77.4  0.0000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.662155  normal  0.855546 
 
 
-
 
NC_009708  YpsIP31758_2057  putative spermidine/putrescine ABC transporter, permease protein  25.23 
 
 
288 aa  77.4  0.0000000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.475072  n/a   
 
 
-
 
NC_009436  Ent638_2126  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
312 aa  77  0.0000000000003  Enterobacter sp. 638  Bacteria  normal  0.43509  normal  0.851329 
 
 
-
 
NC_011901  Tgr7_1262  ABC-type spermidine/putrescine transport system  30 
 
 
322 aa  76.6  0.0000000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0925  binding-protein-dependent transport systems inner membrane component  25 
 
 
554 aa  76.3  0.0000000000005  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2196  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
285 aa  76.6  0.0000000000005  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00879782  n/a   
 
 
-
 
NC_009012  Cthe_1586  binding-protein-dependent transport systems inner membrane component  30.81 
 
 
551 aa  76.6  0.0000000000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3590  binding-protein-dependent transport systems inner membrane component  28.64 
 
 
301 aa  75.9  0.0000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.657903  normal 
 
 
-
 
NC_010498  EcSMS35_1732  ABC transporter, permease protein  34.17 
 
 
313 aa  75.5  0.0000000000009  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.000000109023 
 
 
-
 
CP001509  ECD_01399  predicted spermidine/putrescine transporter subunit  34.17 
 
 
313 aa  75.5  0.000000000001  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2204  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
313 aa  75.5  0.000000000001  Escherichia coli DH1  Bacteria  normal  0.136573  n/a   
 
 
-
 
NC_010159  YpAngola_A2449  putative spermidine/putrescine ABC transporter permease  24.77 
 
 
288 aa  75.1  0.000000000001  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_2217  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
313 aa  75.5  0.000000000001  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.668194 
 
 
-
 
NC_009800  EcHS_A1526  ABC transporter, permease protein  34.17 
 
 
313 aa  75.5  0.000000000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1621  ABC transporter, permease protein  34.17 
 
 
313 aa  75.5  0.000000000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2796  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
355 aa  75.5  0.000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01410  hypothetical protein  34.17 
 
 
313 aa  75.5  0.000000000001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1365  putative putrescine transport system permease protein  29.84 
 
 
302 aa  75.1  0.000000000001  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2169  binding-protein-dependent transport systems inner membrane component  24.77 
 
 
288 aa  75.5  0.000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0596162  n/a   
 
 
-
 
NC_009380  Strop_2546  molybdate ABC transporter, inner membrane subunit  32.89 
 
 
282 aa  75.1  0.000000000001  Salinispora tropica CNB-440  Bacteria  normal  normal  0.914305 
 
 
-
 
NC_011353  ECH74115_2047  ABC transporter, permease protein  34.17 
 
 
313 aa  75.5  0.000000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.0000000000569002 
 
 
-
 
NC_012029  Hlac_2484  binding-protein-dependent transport systems inner membrane component  31.61 
 
 
335 aa  75.1  0.000000000001  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013131  Caci_6722  binding-protein-dependent transport systems inner membrane component  28.71 
 
 
350 aa  74.3  0.000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.14041  normal 
 
 
-
 
NC_013159  Svir_07120  carbohydrate ABC transporter membrane protein  30.49 
 
 
312 aa  74.3  0.000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3521  binding-protein-dependent transport systems inner membrane component  28.77 
 
 
296 aa  74.3  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.248217 
 
 
-
 
NC_014165  Tbis_2689  molybdate ABC transporter inner membrane subunit  32.43 
 
 
269 aa  74.3  0.000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.106468  normal  0.549789 
 
 
-
 
NC_009486  Tpet_1535  binding-protein-dependent transport systems inner membrane component  28.5 
 
 
281 aa  74.3  0.000000000002  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.0000517697  n/a   
 
 
-
 
NC_013440  Hoch_3145  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
303 aa  74.7  0.000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.236219 
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
300 aa  73.9  0.000000000003  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  28.86 
 
 
310 aa  73.9  0.000000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2092  binding-protein-dependent transport systems inner membrane component  27.23 
 
 
284 aa  73.9  0.000000000003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_04850  ABC-type Fe3+ transport system, permease component  34.24 
 
 
587 aa  73.6  0.000000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3644  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
314 aa  73.6  0.000000000004  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1949  molybdate ABC transporter, inner membrane subunit  33.97 
 
 
259 aa  73.2  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.644349  n/a   
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
295 aa  73.2  0.000000000005  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_008688  Pden_5049  binding-protein-dependent transport systems inner membrane component  27.41 
 
 
283 aa  72.8  0.000000000007  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0864  binding-protein-dependent transport systems inner membrane component  29.6 
 
 
308 aa  72.4  0.000000000008  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1872  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
286 aa  72.4  0.000000000008  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0953  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
292 aa  72.4  0.000000000009  Rhodoferax ferrireducens T118  Bacteria  normal  0.568052  n/a   
 
 
-
 
NC_011662  Tmz1t_0624  sulfate ABC transporter, inner membrane subunit CysT  31.49 
 
 
278 aa  72.4  0.000000000009  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
435 aa  72  0.00000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_1272  polyamine ABC transporter, permease protein  29.49 
 
 
301 aa  71.6  0.00000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_0327  molybdate ABC transporter, inner membrane subunit  32.16 
 
 
273 aa  72  0.00000000001  Thermobifida fusca YX  Bacteria  normal  0.0249986  n/a   
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  28.27 
 
 
296 aa  72  0.00000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_010483  TRQ2_1584  binding-protein-dependent transport systems inner membrane component  27.46 
 
 
281 aa  72  0.00000000001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  27.57 
 
 
319 aa  72  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_012669  Bcav_1232  molybdate ABC transporter, inner membrane subunit  29.91 
 
 
286 aa  72  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.177888  normal 
 
 
-
 
NC_008786  Veis_3306  binding-protein-dependent transport systems inner membrane component  28.32 
 
 
312 aa  72  0.00000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.133389 
 
 
-
 
NC_009484  Acry_0540  binding-protein-dependent transport systems inner membrane component  29.46 
 
 
280 aa  71.6  0.00000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0172  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
324 aa  71.2  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_1854  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
347 aa  70.9  0.00000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
293 aa  71.2  0.00000000002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
293 aa  71.2  0.00000000002  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_010511  M446_4044  binding-protein-dependent transport systems inner membrane component  35.45 
 
 
283 aa  70.9  0.00000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.341213  normal 
 
 
-
 
NC_009674  Bcer98_1009  ornithine carbamoyltransferase  25.76 
 
 
266 aa  70.5  0.00000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6718  ABC spermidine/putrescine transporter, inner membrane subunit  33.86 
 
 
307 aa  70.5  0.00000000003  Burkholderia sp. 383  Bacteria  normal  0.0170467  normal 
 
 
-
 
NC_007908  Rfer_1761  Sulfate ABC transporter, permease protein CysT  32.54 
 
 
293 aa  70.5  0.00000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.382351  n/a   
 
 
-
 
NC_009616  Tmel_1819  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
293 aa  70.5  0.00000000003  Thermosipho melanesiensis BI429  Bacteria  normal  0.215175  n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  30 
 
 
320 aa  70.5  0.00000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_009832  Spro_2525  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
330 aa  70.9  0.00000000003  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0624  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
345 aa  70.5  0.00000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.65014 
 
 
-
 
NC_009668  Oant_4154  binding-protein-dependent transport systems inner membrane component  28.28 
 
 
296 aa  70.1  0.00000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.700172  n/a   
 
 
-
 
NC_011901  Tgr7_1261  Ornithine carbamoyltransferase  29.27 
 
 
273 aa  70.1  0.00000000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0299  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
325 aa  70.1  0.00000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3339  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
302 aa  70.1  0.00000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4650  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
563 aa  70.1  0.00000000004  Paracoccus denitrificans PD1222  Bacteria  normal  0.859078  normal 
 
 
-
 
NC_011769  DvMF_1959  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
322 aa  69.7  0.00000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009656  PSPA7_0394  polyamine transport protein PotH  28.14 
 
 
303 aa  70.1  0.00000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.72562  n/a   
 
 
-
 
NC_009901  Spea_0948  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
301 aa  69.7  0.00000000005  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011982  Avi_8148  ABC transporter membrane spanning protein  32.31 
 
 
293 aa  69.3  0.00000000006  Agrobacterium vitis S4  Bacteria  normal  0.46903  n/a   
 
 
-
 
NC_011312  VSAL_I2503  putative transport system, permease protein  25.22 
 
 
566 aa  69.7  0.00000000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1895  binding-protein-dependent transport systems inner membrane component  28.92 
 
 
290 aa  69.3  0.00000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0269803  normal  0.404001 
 
 
-
 
NC_013510  Tcur_2821  molybdate ABC transporter, inner membrane subunit  31.86 
 
 
262 aa  69.3  0.00000000008  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000164471  n/a   
 
 
-
 
NC_010681  Bphyt_2307  binding-protein-dependent transport systems inner membrane component  28.37 
 
 
309 aa  69.3  0.00000000008  Burkholderia phytofirmans PsJN  Bacteria  normal  0.622  normal  0.150857 
 
 
-
 
NC_007952  Bxe_B2704  spermidine/putrescine ABC transporter inner membrane protein  28.43 
 
 
290 aa  69.3  0.00000000008  Burkholderia xenovorans LB400  Bacteria  normal  0.382039  normal 
 
 
-
 
NC_008463  PA14_03950  polyamine transport protein PotH  27.71 
 
 
293 aa  69.3  0.00000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
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