| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1895 |
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| Symbol | |
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| ID | 6284406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2127585 |
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| End bp | 2128457 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621459 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001895527 |
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| Protein GI | 187923885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0269803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.404001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC TTGACGACGC TCGTCCCGGC GCCGCGCCGT GGCTGCTGTC GGGGCCCGCG
CTGCTGCTGT TCGTCGGTTT GCTGCTGGTG CCGCTGCTGC TCACGCTGAT GCTGTCGTTC
CGCGTGTTCA GCGACACGGC CGGCGTCACC GCCGCCTATA CGCTCGCGAA CTACTGGGAA
GTCGTCAGCG ATCCTTACTA CGGCACGATC TTTCTGCGCA CCGCCGGCCT CGCCTTCGCC
GTCACGCTGC TGTCCATCGT GCTCGGCGTG CCGGAGACCA TCGTGCTCGC GCGCATGAAA
CGGCCATGGC AATCGCTGTG TTTGCTGGTC GTGCTCGGCC CGCTGCTCAT CTCCGTGGTG
GTGCGCACGC TCGGCTGGCA GATTCTGCTC GGCAACAACG GCGTACTCAA CAACCTGCTC
CAGGCACTGC ATGTGACCGA CGAACCCATC CGCCTCGTCT TCACGATGAC CGGCATGATC
ATCGCGCTCA CGCACGTGCT GGTGCCCTTC ATGGTGATGT CGGTGTGGGC GACCATGCAA
AAGCTCGACC CGCAAGTGGA ATGGGCTGGC CGCTCGCTCG GCGGCTCGCC GTTTGCGGTA
TTCCGCCGCG TGGTGCTGCC GCAGATCATG CCGGGCGTGC TGTCGGGCTC GATCATCGTG
TTCGCCTTGT CGGCGTCGGC GTTCGCCACG CCGGCGCTGA TCGGCGGCCG GCGCCTCAAG
GTGGTTGCCA CCGCCGCCTA CGACGAGTTC CTCGGCACGC TGAACTGGCC GCTCGGCGCC
AGCATCGCCG TGCTGCTGCT GATCGCCAAC GTGGCGATCG TAATGGGCTG CAGCCGCCTC
GCCGAGCGCC GCTTTCAGCA CATCTTCGAT TGA
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| Protein sequence | MATLDDARPG AAPWLLSGPA LLLFVGLLLV PLLLTLMLSF RVFSDTAGVT AAYTLANYWE
VVSDPYYGTI FLRTAGLAFA VTLLSIVLGV PETIVLARMK RPWQSLCLLV VLGPLLISVV
VRTLGWQILL GNNGVLNNLL QALHVTDEPI RLVFTMTGMI IALTHVLVPF MVMSVWATMQ
KLDPQVEWAG RSLGGSPFAV FRRVVLPQIM PGVLSGSIIV FALSASAFAT PALIGGRRLK
VVATAAYDEF LGTLNWPLGA SIAVLLLIAN VAIVMGCSRL AERRFQHIFD
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