Gene Spro_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3644 
Symbol 
ID5606116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4031116 
End bp4032060 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content60% 
IMG OID640939195 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001479868 
Protein GI157371879 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGA GCATCGACTA TCCCGCGCCG CGCCGCGGTA CTCTGCGCGC CCTGTCGACC 
TTTCTCTATC GCCGGCCGAC GCTGTACCTG TTGCTGTTAT TGGTTCCACC GCTGTTGTGG
TTCGGTGCGG TGTACCTTGG CTCATTACTG ACGCTGCTGT GGCAGGGATT TTATACTTTC
GACGACTTCA CCATGACGGT GACGCCGGAT CTGACCTTCG ATAACCTGCG GGCGCTGTTC
AACCCGGCCA ACTACGACAT TATTCTGCGC ACATTGACCA TGGCGGTGCT GGTGTCGCTG
GCCAGTGCGG TATTGGCGTT CCCGATTGCC TACTACATGG CGCGTTACAC CAGTGGCCGC
GTCAAAGCGT TCTTTTATAT CGCGGTGATG ATGCCGATGT GGGCCAGCTA TATCGTCAAG
GCCTACGCCT GGACGCTGCT GCTGGCAAAG GATGGTGTGG CGCAGTGGTT CCTGCAACAT
CTGGGGCTGG AGCCGGTGTT GGCGGCAATC CTCACCGTGC CGGGCGTTGG AGGCAATACC
CTGTCGACCT CGGGGCTGGG GCGTTTTCTG GTGTTTGTTT ATATCTGGCT GCCGTTCATG
ATCCTGCCGA TCCAGGCGGC GCTGGAACGC CTGCCGCCTT CGTTGCTGCA TGCCTCGGCG
GATTTGGGCG CGCGTCCATC GCAGACTTTC CGTTACGTGA TCCTGCCGTT GGCGGTGCCG
GGCATTGCCG CCGGGTCGAT CTTCACCTTC TCGCTGACGT TGGGGGACTT TATCGTGCCG
CAGCTGGTGG GGCCGCCGGG CTATTTCATC GGCAGCATGG TGTACGCCCA GCAAGGGGCG
ATCGGCAATA TGCCGATGGC AGCGGCCTTT ACCCTGGTGC CGATTGTGTT GATCGCGATT
TATCTTTCCA TTGTGAAACG TCTGGGGGCC TTCGATGCAC TCTGA
 
Protein sequence
MEMSIDYPAP RRGTLRALST FLYRRPTLYL LLLLVPPLLW FGAVYLGSLL TLLWQGFYTF 
DDFTMTVTPD LTFDNLRALF NPANYDIILR TLTMAVLVSL ASAVLAFPIA YYMARYTSGR
VKAFFYIAVM MPMWASYIVK AYAWTLLLAK DGVAQWFLQH LGLEPVLAAI LTVPGVGGNT
LSTSGLGRFL VFVYIWLPFM ILPIQAALER LPPSLLHASA DLGARPSQTF RYVILPLAVP
GIAAGSIFTF SLTLGDFIVP QLVGPPGYFI GSMVYAQQGA IGNMPMAAAF TLVPIVLIAI
YLSIVKRLGA FDAL