Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3644 |
Symbol | |
ID | 5606116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4031116 |
End bp | 4032060 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640939195 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001479868 |
Protein GI | 157371879 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGATGA GCATCGACTA TCCCGCGCCG CGCCGCGGTA CTCTGCGCGC CCTGTCGACC TTTCTCTATC GCCGGCCGAC GCTGTACCTG TTGCTGTTAT TGGTTCCACC GCTGTTGTGG TTCGGTGCGG TGTACCTTGG CTCATTACTG ACGCTGCTGT GGCAGGGATT TTATACTTTC GACGACTTCA CCATGACGGT GACGCCGGAT CTGACCTTCG ATAACCTGCG GGCGCTGTTC AACCCGGCCA ACTACGACAT TATTCTGCGC ACATTGACCA TGGCGGTGCT GGTGTCGCTG GCCAGTGCGG TATTGGCGTT CCCGATTGCC TACTACATGG CGCGTTACAC CAGTGGCCGC GTCAAAGCGT TCTTTTATAT CGCGGTGATG ATGCCGATGT GGGCCAGCTA TATCGTCAAG GCCTACGCCT GGACGCTGCT GCTGGCAAAG GATGGTGTGG CGCAGTGGTT CCTGCAACAT CTGGGGCTGG AGCCGGTGTT GGCGGCAATC CTCACCGTGC CGGGCGTTGG AGGCAATACC CTGTCGACCT CGGGGCTGGG GCGTTTTCTG GTGTTTGTTT ATATCTGGCT GCCGTTCATG ATCCTGCCGA TCCAGGCGGC GCTGGAACGC CTGCCGCCTT CGTTGCTGCA TGCCTCGGCG GATTTGGGCG CGCGTCCATC GCAGACTTTC CGTTACGTGA TCCTGCCGTT GGCGGTGCCG GGCATTGCCG CCGGGTCGAT CTTCACCTTC TCGCTGACGT TGGGGGACTT TATCGTGCCG CAGCTGGTGG GGCCGCCGGG CTATTTCATC GGCAGCATGG TGTACGCCCA GCAAGGGGCG ATCGGCAATA TGCCGATGGC AGCGGCCTTT ACCCTGGTGC CGATTGTGTT GATCGCGATT TATCTTTCCA TTGTGAAACG TCTGGGGGCC TTCGATGCAC TCTGA
|
Protein sequence | MEMSIDYPAP RRGTLRALST FLYRRPTLYL LLLLVPPLLW FGAVYLGSLL TLLWQGFYTF DDFTMTVTPD LTFDNLRALF NPANYDIILR TLTMAVLVSL ASAVLAFPIA YYMARYTSGR VKAFFYIAVM MPMWASYIVK AYAWTLLLAK DGVAQWFLQH LGLEPVLAAI LTVPGVGGNT LSTSGLGRFL VFVYIWLPFM ILPIQAALER LPPSLLHASA DLGARPSQTF RYVILPLAVP GIAAGSIFTF SLTLGDFIVP QLVGPPGYFI GSMVYAQQGA IGNMPMAAAF TLVPIVLIAI YLSIVKRLGA FDAL
|
| |