| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2047 |
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| Symbol | ydcU |
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| ID | 6969116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1944185 |
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| End bp | 1945126 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643385959 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_002270448 |
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| Protein GI | 209397365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000000000569002 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATGA ACGTATTGCA ATCACCTTCA CGTCCAGGTC TGGGTAAGGT GTCCGGTTTC
TTCTGGCGGA ATCCGGGGCT GGGGCTGTTT TTGCTGCTGC TTGGCCCGCT AATGTGGTTT
GGCATTGTCT ATTTCGGCTC GCTGCTAACG CTGTTATGGC AGGGCTTTTA TACCTTTGAC
GATTTCACCA TGTCGGTAAC GCCGGAACTG ACGCTGGCGA ACATCCGTGC GCTGTTTAAT
CCGGCGAATT ACGACATCAT TCTCCGCACG CTGACTATGG CTGTGGCAGT CACTATCGCC
AGCGCCATTC TGGCTTTTCC AATGGCGTGG TATATGGCGC GCTATACCAG CGGGAAAATG
AAAGCGTTTT TTTATATTGC GGTAATGTTG CCGATGTGGG CGAGCTACAT TGTTAAAGCC
TATGCCTGGA CGTTATTGCT GGCAAAAGAT GGCGTGGCTC AGTGGTTTTT ACAACATCTT
GGGCTGGAAC CACTGCTGAC AGCGTTCCTT ACATTACCTG CGGTGGGCGG CAATACGCTG
TCAACTTCCG GGCTGGGGCG CTTTCTGGTG TTTCTCTATA TCTGGCTGCC GTTCATGATC
CTGCCCGTGC AGGCGGCGCT TGAGCGTTTG CCGCCGTCAT TGTTGCAGGC GTCAGCTGAT
CTCGGCGCAC GTCCACGACA AACCTTTCGC TATGTGGTGT TGCCGCTGGC GATCCCGGGT
ATTGCCGCTG GCTCTATCTT TACCTTCTCA CTCACACTGG GCGATTTTAT CGTCCCGCAG
CTGGTTGGCC CGCCAGGATA TTTTATCGGC AATATGGTTT ATTCCCAGCA GGGGGCGATT
GGCAATATGC CGATGGCGGC GGCATTCACC CTGGTGCCGA TTGTTCTTAT CGCACTGTAC
CTGGCGTTCG TGAAACGTCT GGGAGCGTTT GATGCACTCT GA
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| Protein sequence | MAMNVLQSPS RPGLGKVSGF FWRNPGLGLF LLLLGPLMWF GIVYFGSLLT LLWQGFYTFD
DFTMSVTPEL TLANIRALFN PANYDIILRT LTMAVAVTIA SAILAFPMAW YMARYTSGKM
KAFFYIAVML PMWASYIVKA YAWTLLLAKD GVAQWFLQHL GLEPLLTAFL TLPAVGGNTL
STSGLGRFLV FLYIWLPFMI LPVQAALERL PPSLLQASAD LGARPRQTFR YVVLPLAIPG
IAAGSIFTFS LTLGDFIVPQ LVGPPGYFIG NMVYSQQGAI GNMPMAAAFT LVPIVLIALY
LAFVKRLGAF DAL
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