Gene DvMF_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1959 
Symbol 
ID7173877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2420656 
End bp2421624 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID643540475 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002436370 
Protein GI218887049 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC GTAGACCCTT CCGCACCGCC AGCATCGCCG TGGTCTGGTT GTGGCTGGGG 
CTGTTCGCCC TGTTGCCCAA CCTCGGCCTG CTGCTGGTCA CCTTTCTGGA GCGGGGCGAG
TCGGACTTCG TGAGCCTGGT GTTCACGTGG GACAACTACG CCCGCCTCGC CGACCCGGTG
TTCATCAGGA TACTGGGCGA ATCGCTGTGG CTGGCCGCCG CCAGCACCCT GGTGTGCCTG
CTGATCGGCT ACCCGTTCGC CTATGCCGTG GCCACGGCCC GGCGCGGGCT GCGCCCGTGG
CTGCTGCTGC TGGTGGTCAT TCCGTTCTGG ACCAACTCGC TCATCCGCAC CTACGCGCTG
ATCATCATCC TGAAATCGCA GGGCATTGCC TCCAACGTGC TGATGGCCCT GGGTCTGGTC
AGCGAGCCGG TGTCGTTCAT GTACGGCGAG TTCGCCGTGT TCACCGGGCT TACCTACACG
CTGCTGCCGT TCATGATCCT GCCGCTGTAC GCGTCCATAG AAAAGCTGGA CAAGCGGCTG
CTGGACGCGG CCAAGGACCT GGGGGCCAGC AGCCTGCGGG CCTTCTGGCA CGTCACCCTG
CCGCTGACCC TGCCGGGCAT CGTGGCCGGG TGCATGCTGG TGTTCCTGCC CTCGCTGGGG
TGTTTCTACA TTCCGGAAAT CCTGGGCGGG GCCAAGAGCA TGCTCATCGG CAACTTCATC
AAGAACCAGT TCCTGGTGGC GCGCGACTGG CCGCTGGGCG CCGCCGCCAG CACCATCCTG
ACCGTGCTGC TGGTGCTGAT GATCATCGGC TACTGGCTCA GCAGCCGCCG GGTGGCCCTG
CGCGAACGCA AGGGCGCGGA CACCGGGGCT GCCACCGCGG GCCGCACGCC CGATGCGGCG
CAGACAGACG GCGACGACGG CATGACGCCC GGCGCGCATG GCGCACAGGG CGCGCGGGGG
AGGGCGTAG
 
Protein sequence
MTQRRPFRTA SIAVVWLWLG LFALLPNLGL LLVTFLERGE SDFVSLVFTW DNYARLADPV 
FIRILGESLW LAAASTLVCL LIGYPFAYAV ATARRGLRPW LLLLVVIPFW TNSLIRTYAL
IIILKSQGIA SNVLMALGLV SEPVSFMYGE FAVFTGLTYT LLPFMILPLY ASIEKLDKRL
LDAAKDLGAS SLRAFWHVTL PLTLPGIVAG CMLVFLPSLG CFYIPEILGG AKSMLIGNFI
KNQFLVARDW PLGAAASTIL TVLLVLMIIG YWLSSRRVAL RERKGADTGA ATAGRTPDAA
QTDGDDGMTP GAHGAQGARG RA