Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1959 |
Symbol | |
ID | 7173877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2420656 |
End bp | 2421624 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643540475 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002436370 |
Protein GI | 218887049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 103 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC GTAGACCCTT CCGCACCGCC AGCATCGCCG TGGTCTGGTT GTGGCTGGGG CTGTTCGCCC TGTTGCCCAA CCTCGGCCTG CTGCTGGTCA CCTTTCTGGA GCGGGGCGAG TCGGACTTCG TGAGCCTGGT GTTCACGTGG GACAACTACG CCCGCCTCGC CGACCCGGTG TTCATCAGGA TACTGGGCGA ATCGCTGTGG CTGGCCGCCG CCAGCACCCT GGTGTGCCTG CTGATCGGCT ACCCGTTCGC CTATGCCGTG GCCACGGCCC GGCGCGGGCT GCGCCCGTGG CTGCTGCTGC TGGTGGTCAT TCCGTTCTGG ACCAACTCGC TCATCCGCAC CTACGCGCTG ATCATCATCC TGAAATCGCA GGGCATTGCC TCCAACGTGC TGATGGCCCT GGGTCTGGTC AGCGAGCCGG TGTCGTTCAT GTACGGCGAG TTCGCCGTGT TCACCGGGCT TACCTACACG CTGCTGCCGT TCATGATCCT GCCGCTGTAC GCGTCCATAG AAAAGCTGGA CAAGCGGCTG CTGGACGCGG CCAAGGACCT GGGGGCCAGC AGCCTGCGGG CCTTCTGGCA CGTCACCCTG CCGCTGACCC TGCCGGGCAT CGTGGCCGGG TGCATGCTGG TGTTCCTGCC CTCGCTGGGG TGTTTCTACA TTCCGGAAAT CCTGGGCGGG GCCAAGAGCA TGCTCATCGG CAACTTCATC AAGAACCAGT TCCTGGTGGC GCGCGACTGG CCGCTGGGCG CCGCCGCCAG CACCATCCTG ACCGTGCTGC TGGTGCTGAT GATCATCGGC TACTGGCTCA GCAGCCGCCG GGTGGCCCTG CGCGAACGCA AGGGCGCGGA CACCGGGGCT GCCACCGCGG GCCGCACGCC CGATGCGGCG CAGACAGACG GCGACGACGG CATGACGCCC GGCGCGCATG GCGCACAGGG CGCGCGGGGG AGGGCGTAG
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Protein sequence | MTQRRPFRTA SIAVVWLWLG LFALLPNLGL LLVTFLERGE SDFVSLVFTW DNYARLADPV FIRILGESLW LAAASTLVCL LIGYPFAYAV ATARRGLRPW LLLLVVIPFW TNSLIRTYAL IIILKSQGIA SNVLMALGLV SEPVSFMYGE FAVFTGLTYT LLPFMILPLY ASIEKLDKRL LDAAKDLGAS SLRAFWHVTL PLTLPGIVAG CMLVFLPSLG CFYIPEILGG AKSMLIGNFI KNQFLVARDW PLGAAASTIL TVLLVLMIIG YWLSSRRVAL RERKGADTGA ATAGRTPDAA QTDGDDGMTP GAHGAQGARG RA
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