| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8148 |
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| Symbol | potB |
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| ID | 7365063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | + |
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| Start bp | 101072 |
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| End bp | 101953 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643641765 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002540062 |
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| Protein GI | 222080199 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.46903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGG CTCTTTCTCA AAAAAATGAC AGGCTGCGCA TCCTCCTACT CTTGGCGCCT
GCAATCATCC TGCTTCTTCT GCTGATCGTG GCGCCGACAG CGACTATGAT CCGTTACAGC
TTCAATACAT ATATCGGTGG TGGCCGGGAC GCATCGGGCC TCAGCCTCGA GAACTGGAAA
ATGTTCTTCT CGGACCCCTA TTATTTCCTG GGGCTCTGGA AGACGATGCG TATCGCTGTT
GAGGCAACGG TGATCGCGGT CTTTATCGCC TATCCGGTGG CCTATACGAT CGCTTTCAGC
TCCCGGGTTT GGCGCCCATT CCTGTTGATC TTGCTCGTGC TTCCCTTCTG GATCAGCTTC
ATCATCAGAA ACCTTGCCTG GATCAATATT CTGGGAGAGC GCGGCGCCAT AAATGCGTTG
CTGATGGGAC TTGGCCTGAC CGATAGCCCG CTCAAGTTTC TATACACTGA ATTCTCGGTG
ATACTTGGCA TACTGAGCTT TGTGCTGCCC TACATCATCC TGAACATCTA TGTGAGCCTC
GATGGCATCG ACCGGAACTT GCTTCACGCC GCTCGAACGC TGGGTTGCAC GTCATGGCAG
GCGTTCCTGG AAATAACCCT TCCGTTGTCT CTTCCAGGAC TATGCTCTGG CGTCCTCCTG
TCGCTCGTCC TCGCTGCCGG CACTTACATC ACGCCAGCTC TGTTGGGCGG GCCTGACAAT
TTCATGTTCG GCAACATCAT CGCTGACACG ATCAGCCTCG AGCTGAATTG GCCAATGGGC
GCGGTTTTGT CGCTCGCATT GACATTTTTG CTGCTGCTTC TCACCGCCAT TTACAGCCGC
TTCCTTGGCA TCGGCTCCAT CACGAAAGGA TTGACGCGAT GA
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| Protein sequence | MAVALSQKND RLRILLLLAP AIILLLLLIV APTATMIRYS FNTYIGGGRD ASGLSLENWK
MFFSDPYYFL GLWKTMRIAV EATVIAVFIA YPVAYTIAFS SRVWRPFLLI LLVLPFWISF
IIRNLAWINI LGERGAINAL LMGLGLTDSP LKFLYTEFSV ILGILSFVLP YIILNIYVSL
DGIDRNLLHA ARTLGCTSWQ AFLEITLPLS LPGLCSGVLL SLVLAAGTYI TPALLGGPDN
FMFGNIIADT ISLELNWPMG AVLSLALTFL LLLLTAIYSR FLGIGSITKG LTR
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