Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3040 |
Symbol | |
ID | 4898594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 49026 |
End bp | 49898 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113642 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001044912 |
Protein GI | 126463799 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.662155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.855546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCG TTCCCGCGGT CGCGGCCGGC CGGCGGCCGA TGGGCGGGCA GCAGGTGGCG GTGGCGCTCC TCCTGCCCAT CGCCCTCATC AATGTGGTGG GCTTCATGCT GCCCATCTTC AACCTCGCCC GCTATTCCTT CAACCGGGCG ACGGTGGGCG GGGGGATCGA GAATGTCCTG ACGCTCCAGA ACTGGACCGG GCTTCTCGGC GACCCGTTCT ATCTGCAGCT GATCCTGAAT TCGGTCTTCG TCTCGCTCGG GGTCACGCTC TGTGCACTCG TCCTGTCCTA TCCGATCGCG CTCTATCTCC ACCGCGCCTC GGGCAGCTGG CGGACCTTCC TCACCGTGCT CGTGATCTCG CCGCTCCTGA CCTCGGCGGT GGTGCGCACC TACGGCTGGA TCGCGATCCT CGCCGAGGAG GGGCCGGTCG TCTCGGCGAT CCGGGGCCTG GGCCTCACGC CGCCGCCGCT CATGTTCAAC ATCAACGGCG TCTTCATCGG CCTGACCGAG ATCCTGATGC CCTACATGAT CCTCGCTCTC CTCGCGGGGT TCGGGCGGCT CGATCCGCGG GTCGAGGAGG CCGCGCGCAC GCTGGGCGCC ACCCCCTGGC AGAGCTTCCG GCGCGTGATC CTGCCGCTGA CCGCGCCCGG CATCGCGCTG GGGTGCCTCC TGTGCTTCGT GCTGGCGGTC TCGTCCTTCA TCACGCCGAA GCTCATGGGG GGCGGGCGCG TCTTCCTGCT CGCGACCGAG ATCTACGATC AGGCCATCGT GACCCTGAAC TGGCCGCTGG CCTCGACGCT CTCGATCCTC GTCCTCGTGA TCTTCGGGGC GGCGCTCGTG GCCTATTCCG CCGTGCTGAA ACGTCTGGAC TGA
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Protein sequence | MTAVPAVAAG RRPMGGQQVA VALLLPIALI NVVGFMLPIF NLARYSFNRA TVGGGIENVL TLQNWTGLLG DPFYLQLILN SVFVSLGVTL CALVLSYPIA LYLHRASGSW RTFLTVLVIS PLLTSAVVRT YGWIAILAEE GPVVSAIRGL GLTPPPLMFN INGVFIGLTE ILMPYMILAL LAGFGRLDPR VEEAARTLGA TPWQSFRRVI LPLTAPGIAL GCLLCFVLAV SSFITPKLMG GGRVFLLATE IYDQAIVTLN WPLASTLSIL VLVIFGAALV AYSAVLKRLD
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