| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0540 |
|---|
| Symbol | |
|---|
| ID | 5160604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 602900 |
|---|
| End bp | 603742 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640552456 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001233683 |
|---|
| Protein GI | 148259556 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCCA TCTCGATGGG AAAATCGACG CGCCGTTCGC TGCTGGCGAT GAGCCTGCCG
GTCTATCTGC TGCTCTATGC GCCACTCCTT CTGATCGCGA TCTTTTCCTT CGCGCCGCCG
CCGCTGGCGA AGGGACAGAC CTTCTACTGG TATGCCGACC TGCTGCATTC GCCCGAGGTC
ATCGCGGCGT TCCGGCGATC GCTGACGCTG GCGATCGGCT CCTCGATCCT GGGGACGGCT
CTGGGCACGC TGATGGGCTT CGGCCTCTAT CGTTACCGCG ACCGCAACGC GACCGGCATC
GCCAGCGCGC TGCCGAGCCT GATCATCTAC ACGCCGATCA TCATGCCGAG CCTGGTGTTC
GGGATTTCGG AGCTGATCTT CTTCAGCTTC ATCCACAGCG CGACCGGATT TCTGGCCGCC
GGGCTGCTGA CGATGGGCAT CGCGCATGTC ACCTTCGAGG CACCGTTCGT CGCCCTCGTG
GTGTTCGCGC GGCTGTCGGG GCTCGATCCG AACATGTTCG AGGCCTCGCA CGATCTCTAC
GCCGATGCGC GGCAATCCTT CCTGCACCTG ACCGTGCCGG TGATCCGGCC GGCGATCATC
GGCGGTTTCC TGCTCGCCTT CACGCTGTCG ATCGACGATT TCACGATCAG CTTCTTCACC
GCCGGGCCGG GCAGCACGAC GCTGCCGATC TACATCTACA GCGCGGTGGC GCGGAAGGGC
GTGTCGCCCG ACATCAACGC GCTGGCCACG CTGATGATCG CCACCGTCAT CGGCACCGGG
CTGCTGCAAT ACATGTTCAC GAGAAACCGG GCGCGAAAGC TCGTCGCGCG ACCTGGAGAC
TGA
|
|---|
| Protein sequence | MMAISMGKST RRSLLAMSLP VYLLLYAPLL LIAIFSFAPP PLAKGQTFYW YADLLHSPEV
IAAFRRSLTL AIGSSILGTA LGTLMGFGLY RYRDRNATGI ASALPSLIIY TPIIMPSLVF
GISELIFFSF IHSATGFLAA GLLTMGIAHV TFEAPFVALV VFARLSGLDP NMFEASHDLY
ADARQSFLHL TVPVIRPAII GGFLLAFTLS IDDFTISFFT AGPGSTTLPI YIYSAVARKG
VSPDINALAT LMIATVIGTG LLQYMFTRNR ARKLVARPGD
|
|---|
| |