Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2914 |
Symbol | |
ID | 4117393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 2919297 |
End bp | 2920133 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638037684 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_645636 |
Protein GI | 108805699 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGGCTCG CCGGGCTGCT CGCGCCGGCG GCGCTGTGGC TCGGGCTCTT CTTTCTCGCG CCGCTGCTGC TGATCCTGGC CTACTCCTTC GGGACCAGCG GGGTCTACGG CGGGATCACG CTCGGCTTCA ACCCCTCGAA CTACCTCAAG GTGCTCGACC CGCTCTACCT GGAGATAGTC GTCCGCACCC TCGTCATCGC CGTCGCCAAC ACCCTGCTGT GCCTGCTCAT CGGCTACCCG CTGGCCTACT TCATAGCCTT CCGGGGCGGC CGGTGGAAGA GCACCCTCAT CCTGCTCGTC ATGATCCCCT TCTGGACCAG CCTGCTGCTC AGGGCCTACG CCTGGGTCGT CATCCTCAGC GGCAACGGGC TCGCCAACCG GGCGCTGCAG TTCCTCGGGC TCACCGAGGA GCCGCTGAAC CTGATCTTCA CGACCAAGGC GGTGATGATG GGGATGGTCT ACTCGTACCT GCCGTTCATG ATCCTGCCGC TGTACGCCGC GCTGGAGAAG TTCGACGTGC GGCTCAAGGA GGCGGCCCAG GACCTCGGGG CCGGGCGCTG GAGCACCTTC TGGCGGGTAA CCTTCCCCCT GAGCATGCCC GGCGTCATCG CCGGCTCCAT CCTGGTCTTC ATCCCCTCGG CCGGGGAGTT CGTCATCCCC AACCTCCTCG GCGGGGCGCG CACCGTGATG ATGGGCAACC TGATCCAGCA GCAGTTCCTC AACGCCCGCG ACTGGGCCTT CGGGAGCGCG CTGGCGGTGA TGCTGGCGGC CCTGCTGCTG GCGGCGATCC TGTTCTACGT CCGCAGGGTG GGCGCCGAGC GTCTGGAGGG GGTGTAG
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Protein sequence | MGLAGLLAPA ALWLGLFFLA PLLLILAYSF GTSGVYGGIT LGFNPSNYLK VLDPLYLEIV VRTLVIAVAN TLLCLLIGYP LAYFIAFRGG RWKSTLILLV MIPFWTSLLL RAYAWVVILS GNGLANRALQ FLGLTEEPLN LIFTTKAVMM GMVYSYLPFM ILPLYAALEK FDVRLKEAAQ DLGAGRWSTF WRVTFPLSMP GVIAGSILVF IPSAGEFVIP NLLGGARTVM MGNLIQQQFL NARDWAFGSA LAVMLAALLL AAILFYVRRV GAERLEGV
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