Gene Rxyl_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2914 
Symbol 
ID4117393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2919297 
End bp2920133 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID638037684 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_645636 
Protein GI108805699 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGGCTCG CCGGGCTGCT CGCGCCGGCG GCGCTGTGGC TCGGGCTCTT CTTTCTCGCG 
CCGCTGCTGC TGATCCTGGC CTACTCCTTC GGGACCAGCG GGGTCTACGG CGGGATCACG
CTCGGCTTCA ACCCCTCGAA CTACCTCAAG GTGCTCGACC CGCTCTACCT GGAGATAGTC
GTCCGCACCC TCGTCATCGC CGTCGCCAAC ACCCTGCTGT GCCTGCTCAT CGGCTACCCG
CTGGCCTACT TCATAGCCTT CCGGGGCGGC CGGTGGAAGA GCACCCTCAT CCTGCTCGTC
ATGATCCCCT TCTGGACCAG CCTGCTGCTC AGGGCCTACG CCTGGGTCGT CATCCTCAGC
GGCAACGGGC TCGCCAACCG GGCGCTGCAG TTCCTCGGGC TCACCGAGGA GCCGCTGAAC
CTGATCTTCA CGACCAAGGC GGTGATGATG GGGATGGTCT ACTCGTACCT GCCGTTCATG
ATCCTGCCGC TGTACGCCGC GCTGGAGAAG TTCGACGTGC GGCTCAAGGA GGCGGCCCAG
GACCTCGGGG CCGGGCGCTG GAGCACCTTC TGGCGGGTAA CCTTCCCCCT GAGCATGCCC
GGCGTCATCG CCGGCTCCAT CCTGGTCTTC ATCCCCTCGG CCGGGGAGTT CGTCATCCCC
AACCTCCTCG GCGGGGCGCG CACCGTGATG ATGGGCAACC TGATCCAGCA GCAGTTCCTC
AACGCCCGCG ACTGGGCCTT CGGGAGCGCG CTGGCGGTGA TGCTGGCGGC CCTGCTGCTG
GCGGCGATCC TGTTCTACGT CCGCAGGGTG GGCGCCGAGC GTCTGGAGGG GGTGTAG
 
Protein sequence
MGLAGLLAPA ALWLGLFFLA PLLLILAYSF GTSGVYGGIT LGFNPSNYLK VLDPLYLEIV 
VRTLVIAVAN TLLCLLIGYP LAYFIAFRGG RWKSTLILLV MIPFWTSLLL RAYAWVVILS
GNGLANRALQ FLGLTEEPLN LIFTTKAVMM GMVYSYLPFM ILPLYAALEK FDVRLKEAAQ
DLGAGRWSTF WRVTFPLSMP GVIAGSILVF IPSAGEFVIP NLLGGARTVM MGNLIQQQFL
NARDWAFGSA LAVMLAALLL AAILFYVRRV GAERLEGV