More than 300 homologs were found in PanDaTox collection
for query gene CHU_3310 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008255  CHU_3310  phosphoribosylglycinamide formyltransferase  100 
 
 
195 aa  396  9.999999999999999e-111  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0719  phosphoribosylglycinamide formyltransferase  54.95 
 
 
193 aa  214  7e-55  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0810  formyl transferase domain protein  50 
 
 
192 aa  206  2e-52  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2482  formyl transferase domain protein  49.46 
 
 
189 aa  201  4e-51  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.712391  normal 
 
 
-
 
NC_009441  Fjoh_1136  phosphoribosylglycinamide formyltransferase  49.44 
 
 
189 aa  194  7e-49  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4818  phosphoribosylglycinamide formyltransferase  48.07 
 
 
193 aa  194  9e-49  Spirosoma linguale DSM 74  Bacteria  normal  0.519157  normal  0.21645 
 
 
-
 
NC_013132  Cpin_0530  phosphoribosylglycinamide formyltransferase  50.28 
 
 
188 aa  187  7e-47  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1766  phosphoribosylglycinamide formyltransferase  43.48 
 
 
193 aa  178  4.999999999999999e-44  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_011060  Ppha_2279  phosphoribosylglycinamide formyltransferase  43.32 
 
 
200 aa  158  5e-38  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.261217  n/a   
 
 
-
 
NC_013501  Rmar_1872  phosphoribosylglycinamide formyltransferase  42.39 
 
 
222 aa  156  2e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1701  phosphoribosylglycinamide formyltransferase  42.78 
 
 
200 aa  156  2e-37  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.489442  normal 
 
 
-
 
NC_010831  Cphamn1_1878  phosphoribosylglycinamide formyltransferase  40.32 
 
 
200 aa  151  5e-36  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.00301418 
 
 
-
 
NC_012034  Athe_1446  phosphoribosylglycinamide formyltransferase  43.85 
 
 
218 aa  150  1e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1765  phosphoribosylglycinamide formyltransferase  38.02 
 
 
204 aa  150  1e-35  Chlorobium limicola DSM 245  Bacteria  normal  0.916451  n/a   
 
 
-
 
NC_007512  Plut_0431  phosphoribosylglycinamide formyltransferase  36.9 
 
 
200 aa  146  1.0000000000000001e-34  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0504  phosphoribosylglycinamide formyltransferase  38.38 
 
 
200 aa  145  4.0000000000000006e-34  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.304229  n/a   
 
 
-
 
NC_008261  CPF_0676  phosphoribosylglycinamide formyltransferase  40.32 
 
 
204 aa  142  4e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1978  phosphoribosylglycinamide formyltransferase  36.22 
 
 
200 aa  141  5e-33  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0674  phosphoribosylglycinamide formyltransferase  39.78 
 
 
204 aa  140  9.999999999999999e-33  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1281  phosphoribosylglycinamide formyltransferase  39.06 
 
 
195 aa  139  1.9999999999999998e-32  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_04220  phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent  38.62 
 
 
212 aa  139  3e-32  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_0726  phosphoribosylglycinamide formyltransferase  37.89 
 
 
206 aa  137  7e-32  Eggerthella lenta DSM 2243  Bacteria  normal  0.303566  normal 
 
 
-
 
NC_009253  Dred_2363  phosphoribosylglycinamide formyltransferase  40 
 
 
203 aa  136  2e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_03155  phosphoribosylglycinamide formyltransferase  56.14 
 
 
130 aa  136  2e-31  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3468  phosphoribosylglycinamide formyltransferase  37.99 
 
 
207 aa  135  4e-31  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1130  phosphoribosylglycinamide formyltransferase  37.95 
 
 
195 aa  135  5e-31  Oenococcus oeni PSU-1  Bacteria  hitchhiker  0.00861334  n/a   
 
 
-
 
NC_007355  Mbar_A1295  phosphoribosylglycinamide formyltransferase  38.38 
 
 
204 aa  134  9.999999999999999e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.295392  normal  0.387449 
 
 
-
 
NC_013171  Apre_1109  formyl transferase domain protein  38.25 
 
 
181 aa  132  1.9999999999999998e-30  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0524  phosphoribosylglycinamide formyltransferase  38.38 
 
 
204 aa  132  3e-30  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2154  phosphoribosylglycinamide formyltransferase  37.17 
 
 
206 aa  132  3e-30  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000463189  n/a   
 
 
-
 
NC_013165  Shel_01770  phosphoribosylglycinamide formyltransferase  38.25 
 
 
201 aa  132  3.9999999999999996e-30  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_0733  phosphoribosylglycinamide formyltransferase  37.91 
 
 
211 aa  130  1.0000000000000001e-29  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.54904 
 
 
-
 
NC_007413  Ava_0564  phosphoribosylglycinamide formyltransferase  35.83 
 
 
218 aa  129  3e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.513649  normal  0.0898016 
 
 
-
 
NC_013411  GYMC61_1138  phosphoribosylglycinamide formyltransferase  37.84 
 
 
210 aa  128  5.0000000000000004e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_1292  phosphoribosylglycinamide formyltransferase  37.17 
 
 
218 aa  127  1.0000000000000001e-28  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000000519718  n/a   
 
 
-
 
NC_013203  Apar_0035  phosphoribosylglycinamide formyltransferase  36.17 
 
 
204 aa  127  1.0000000000000001e-28  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0218  phosphoribosylglycinamide formyltransferase  36.9 
 
 
206 aa  126  2.0000000000000002e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2111  phosphoribosylglycinamide formyltransferase  33.71 
 
 
189 aa  125  4.0000000000000003e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2234  phosphoribosylglycinamide formyltransferase  33.69 
 
 
225 aa  125  4.0000000000000003e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.364169  normal 
 
 
-
 
NC_013223  Dret_0253  phosphoribosylglycinamide formyltransferase  37.7 
 
 
229 aa  125  5e-28  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4633  phosphoribosylglycinamide formyltransferase  37.02 
 
 
239 aa  125  5e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.614886  normal 
 
 
-
 
NC_013926  Aboo_0482  phosphoribosylglycinamide formyltransferase  39.56 
 
 
313 aa  124  7e-28  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_008609  Ppro_1773  phosphoribosylglycinamide formyltransferase  35.08 
 
 
206 aa  124  8.000000000000001e-28  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000000352591  n/a   
 
 
-
 
NC_010814  Glov_2107  phosphoribosylglycinamide formyltransferase  36.56 
 
 
206 aa  124  9e-28  Geobacter lovleyi SZ  Bacteria  unclonable  0.000000116567  n/a   
 
 
-
 
NC_008789  Hhal_0711  phosphoribosylglycinamide formyltransferase  34.41 
 
 
222 aa  124  1e-27  Halorhodospira halophila SL1  Bacteria  normal  0.910177  n/a   
 
 
-
 
NC_007517  Gmet_1845  phosphoribosylglycinamide formyltransferase  36.41 
 
 
206 aa  124  1e-27  Geobacter metallireducens GS-15  Bacteria  normal  0.0151726  normal  0.945395 
 
 
-
 
NC_012793  GWCH70_0262  phosphoribosylglycinamide formyltransferase  40.21 
 
 
194 aa  124  1e-27  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1759  phosphoribosylglycinamide formyltransferase  34.21 
 
 
206 aa  122  2e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.192447  n/a   
 
 
-
 
NC_008817  P9515_09731  phosphoribosylglycinamide formyltransferase  32.98 
 
 
218 aa  122  3e-27  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.372545  n/a   
 
 
-
 
NC_009360  OSTLU_6266  predicted protein  38.17 
 
 
206 aa  122  4e-27  Ostreococcus lucimarinus CCE9901  Eukaryota  decreased coverage  0.00248936  normal  0.275546 
 
 
-
 
NC_009719  Plav_3332  phosphoribosylglycinamide formyltransferase  36.7 
 
 
214 aa  121  5e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.131556 
 
 
-
 
NC_007519  Dde_2835  phosphoribosylglycinamide formyltransferase  35.26 
 
 
224 aa  122  5e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0326  phosphoribosylglycinamide formyltransferase  37.57 
 
 
195 aa  121  6e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_52050  phosphoribosylglycinamide formyltransferase  34.39 
 
 
222 aa  121  6e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00472013 
 
 
-
 
NC_008740  Maqu_0945  phosphoribosylglycinamide formyltransferase  37.23 
 
 
220 aa  121  6e-27  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1032  phosphoribosylglycinamide formyltransferase  32.79 
 
 
187 aa  121  8e-27  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0272  phosphoribosylglycinamide formyltransferase  38.25 
 
 
195 aa  120  9.999999999999999e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1102  phosphoribosylglycinamide formyltransferase  34.38 
 
 
214 aa  120  9.999999999999999e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1129  phosphoribosylglycinamide formyltransferase  34.76 
 
 
214 aa  120  9.999999999999999e-27  Cyanothece sp. PCC 8802  Bacteria  normal  0.0806783  normal  0.462935 
 
 
-
 
NC_008576  Mmc1_2317  phosphoribosylglycinamide formyltransferase  35.48 
 
 
220 aa  120  9.999999999999999e-27  Magnetococcus sp. MC-1  Bacteria  normal  0.205766  normal  0.80837 
 
 
-
 
NC_005945  BAS0284  phosphoribosylglycinamide formyltransferase  37.02 
 
 
195 aa  120  1.9999999999999998e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0269  phosphoribosylglycinamide formyltransferase  37.02 
 
 
195 aa  120  1.9999999999999998e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0329  phosphoribosylglycinamide formyltransferase  37.02 
 
 
195 aa  120  1.9999999999999998e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0297  phosphoribosylglycinamide formyltransferase  37.02 
 
 
195 aa  120  1.9999999999999998e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2403  phosphoribosylglycinamide formyltransferase  33.85 
 
 
204 aa  120  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4565  phosphoribosylglycinamide formyltransferase  33.51 
 
 
222 aa  119  1.9999999999999998e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1664  phosphoribosylglycinamide formyltransferase  33.68 
 
 
217 aa  119  3e-26  Pseudomonas putida KT2440  Bacteria  normal  0.278539  normal  0.657549 
 
 
-
 
NC_009439  Pmen_2997  phosphoribosylglycinamide formyltransferase  32.45 
 
 
214 aa  119  3e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.386914  hitchhiker  0.000268593 
 
 
-
 
NC_011725  BCB4264_A0343  phosphoribosylglycinamide formyltransferase  37.02 
 
 
195 aa  119  3e-26  Bacillus cereus B4264  Bacteria  normal  0.542492  n/a   
 
 
-
 
NC_010003  Pmob_1778  phosphoribosylglycinamide formyltransferase  33.51 
 
 
192 aa  119  3e-26  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1247  phosphoribosylglycinamide formyltransferase  32.22 
 
 
209 aa  119  3e-26  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000481744  n/a   
 
 
-
 
NC_011661  Dtur_1417  phosphoribosylglycinamide formyltransferase  37.1 
 
 
205 aa  119  3e-26  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000602325  n/a   
 
 
-
 
NC_007492  Pfl01_1632  phosphoribosylglycinamide formyltransferase  32.99 
 
 
216 aa  118  3.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0554809 
 
 
-
 
NC_010506  Swoo_2745  phosphoribosylglycinamide formyltransferase  32.64 
 
 
214 aa  118  4.9999999999999996e-26  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000000377179  hitchhiker  0.000393205 
 
 
-
 
NC_010725  Mpop_2023  phosphoribosylglycinamide formyltransferase  35.16 
 
 
219 aa  118  4.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0370  phosphoribosylglycinamide formyltransferase  37.02 
 
 
195 aa  118  4.9999999999999996e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1063  phosphoribosylglycinamide formyltransferase  31.09 
 
 
212 aa  118  4.9999999999999996e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0478  phosphoribosylglycinamide formyltransferase  35.23 
 
 
212 aa  118  4.9999999999999996e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009901  Spea_2578  phosphoribosylglycinamide formyltransferase  33.16 
 
 
214 aa  118  4.9999999999999996e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0668688  n/a   
 
 
-
 
NC_007005  Psyr_3690  phosphoribosylglycinamide formyltransferase  33.16 
 
 
216 aa  118  6e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.864702  decreased coverage  0.000250374 
 
 
-
 
NC_007969  Pcryo_1857  phosphoribosylglycinamide formyltransferase  35.94 
 
 
230 aa  118  6e-26  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.147651 
 
 
-
 
NC_011899  Hore_22100  phosphoribosylglycinamide formyltransferase  36.36 
 
 
205 aa  118  6e-26  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1816  phosphoribosylglycinamide formyltransferase  33.33 
 
 
204 aa  118  6e-26  Geobacter sp. M21  Bacteria  n/a    normal  0.0209797 
 
 
-
 
NC_011898  Ccel_2182  phosphoribosylglycinamide formyltransferase  35 
 
 
207 aa  117  7e-26  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3197  phosphoribosylglycinamide formyltransferase  33.33 
 
 
213 aa  117  7.999999999999999e-26  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.000983298  n/a   
 
 
-
 
NC_011901  Tgr7_2254  phosphoribosylglycinamide formyltransferase  31.77 
 
 
223 aa  117  9e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.9402  n/a   
 
 
-
 
NC_014148  Plim_1759  phosphoribosylglycinamide formyltransferase  32.8 
 
 
214 aa  117  9.999999999999999e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1699  phosphoribosylglycinamide formyltransferase  33.51 
 
 
216 aa  117  9.999999999999999e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.26745  n/a   
 
 
-
 
NC_011138  MADE_02149  phosphoribosylglycinamide formyltransferase  31.75 
 
 
216 aa  117  9.999999999999999e-26  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0958  phosphoribosylglycinamide formyltransferase  36.96 
 
 
209 aa  117  9.999999999999999e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  0.779009  normal 
 
 
-
 
NC_010644  Emin_0522  formyl transferase domain-containing protein  34.97 
 
 
187 aa  117  9.999999999999999e-26  Elusimicrobium minutum Pei191  Bacteria  normal  0.220861  normal  0.682317 
 
 
-
 
NC_010322  PputGB1_1262  phosphoribosylglycinamide formyltransferase  33.16 
 
 
217 aa  117  9.999999999999999e-26  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0400953 
 
 
-
 
NC_011772  BCG9842_B4977  phosphoribosylglycinamide formyltransferase  37.02 
 
 
195 aa  117  9.999999999999999e-26  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4054  phosphoribosylglycinamide formyltransferase  33.16 
 
 
217 aa  117  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007798  NSE_0474  phosphoribosylglycinamide formyltransferase  35.87 
 
 
192 aa  116  1.9999999999999998e-25  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  0.462514  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1929  phosphoribosylglycinamide formyltransferase  31.02 
 
 
215 aa  115  3.9999999999999997e-25  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2809  phosphoribosylglycinamide formyltransferase  34.55 
 
 
217 aa  115  3.9999999999999997e-25  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1020  phosphoribosylglycinamide formyltransferase  34.22 
 
 
197 aa  115  3.9999999999999997e-25  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2337  phosphoribosylglycinamide formyltransferase  34.62 
 
 
219 aa  115  3.9999999999999997e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0039  phosphoribosylglycinamide formyltransferase  36.46 
 
 
225 aa  115  5e-25  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
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