| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2317 |
|---|
| Symbol | |
|---|
| ID | 4480937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2949037 |
|---|
| End bp | 2949699 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639723065 |
|---|
| Product | phosphoribosylglycinamide formyltransferase |
|---|
| Protein accession | YP_866223 |
|---|
| Protein GI | 117925606 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
|---|
| TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.205766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.80837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGG CAAGCTTTCG TATTGGTGTA CTGATCTCGG GTTCTGGCAG CAATCTGCAA
GCTCTTATTG ATGGGGTTAA GAGCGGTTTT ATTCCCGCAG AGATCGCCTT GGTGATTAGC
AATAAGGCCG ATGCCTATGG CCTGACCCGT GCCCGCGAGG CGGGGATTGA GACGCGGGTG
GTGGATCATA AAACCTTTGA GGGCCGCAGC CCTTTTGAGC ATGAACTTAT TCGCGCGCTG
GATGATGCCG GTGTGGAGTT GGTCTGTTTG GCTGGTTTTA TGCGGGTATT GACCCCCCTA
TTTGTGCGCC ACTATTTGGG CCGGTTGATC AACATTCACC CCTCTTTACT GCCCGCTTTT
GCAGGGCTGC ATGTGCAGCA GCGGGCCATT GATGCGGGGG TGCGTTTTAG TGGCTGTACC
GTCCATTTTG TGGAAGAAGA GGTGGATGCA GGGCCTATTA TCGCCCAAGC GGTGGTACCT
GTACTGCCCA GCGACCGTGC TGAAGATCTG GCCAAGCGCA TTTTAACCCA AGAGCACCGG
CTCTATCCGT GGGCGGTTAA GCTGTTTGTG GAGGGGCGCA CCCAGGTTAA GGAGCGGGTC
GTACATATTC AACCGGCCCA ATGGGGCGCT GAGCAGGCAT TGATCGGCCC AACCCCCGAC
TGA
|
|---|
| Protein sequence | MSGASFRIGV LISGSGSNLQ ALIDGVKSGF IPAEIALVIS NKADAYGLTR AREAGIETRV
VDHKTFEGRS PFEHELIRAL DDAGVELVCL AGFMRVLTPL FVRHYLGRLI NIHPSLLPAF
AGLHVQQRAI DAGVRFSGCT VHFVEEEVDA GPIIAQAVVP VLPSDRAEDL AKRILTQEHR
LYPWAVKLFV EGRTQVKERV VHIQPAQWGA EQALIGPTPD
|
|---|
| |