More than 300 homologs were found in PanDaTox collection
for query gene Dfer_2482 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_2482  formyl transferase domain protein  100 
 
 
189 aa  391  1e-108  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.712391  normal 
 
 
-
 
NC_013730  Slin_4818  phosphoribosylglycinamide formyltransferase  70.59 
 
 
193 aa  280  6.000000000000001e-75  Spirosoma linguale DSM 74  Bacteria  normal  0.519157  normal  0.21645 
 
 
-
 
NC_013162  Coch_0719  phosphoribosylglycinamide formyltransferase  59.14 
 
 
193 aa  234  6e-61  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0530  phosphoribosylglycinamide formyltransferase  54.55 
 
 
188 aa  216  1e-55  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0810  formyl transferase domain protein  54.01 
 
 
192 aa  211  3.9999999999999995e-54  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_002950  PG1766  phosphoribosylglycinamide formyltransferase  51.06 
 
 
193 aa  209  1e-53  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_009441  Fjoh_1136  phosphoribosylglycinamide formyltransferase  53.48 
 
 
189 aa  203  1e-51  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3310  phosphoribosylglycinamide formyltransferase  49.46 
 
 
195 aa  201  4e-51  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2279  phosphoribosylglycinamide formyltransferase  41.67 
 
 
200 aa  154  9e-37  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.261217  n/a   
 
 
-
 
NC_007514  Cag_0504  phosphoribosylglycinamide formyltransferase  41.88 
 
 
200 aa  151  5.9999999999999996e-36  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.304229  n/a   
 
 
-
 
NC_010803  Clim_1765  phosphoribosylglycinamide formyltransferase  40.53 
 
 
204 aa  150  1e-35  Chlorobium limicola DSM 245  Bacteria  normal  0.916451  n/a   
 
 
-
 
NC_008639  Cpha266_1978  phosphoribosylglycinamide formyltransferase  38.54 
 
 
200 aa  145  3e-34  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_03155  phosphoribosylglycinamide formyltransferase  57.26 
 
 
130 aa  142  4e-33  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1878  phosphoribosylglycinamide formyltransferase  37.37 
 
 
200 aa  140  9.999999999999999e-33  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.00301418 
 
 
-
 
NC_007512  Plut_0431  phosphoribosylglycinamide formyltransferase  36.46 
 
 
200 aa  140  9.999999999999999e-33  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2111  phosphoribosylglycinamide formyltransferase  38.95 
 
 
189 aa  139  3e-32  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1154  phosphoribosylglycinamide formyltransferase  40.72 
 
 
188 aa  138  3.9999999999999997e-32  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1132  phosphoribosylglycinamide formyltransferase  40.72 
 
 
188 aa  138  3.9999999999999997e-32  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.731363  n/a   
 
 
-
 
NC_011059  Paes_1701  phosphoribosylglycinamide formyltransferase  38.1 
 
 
200 aa  137  1e-31  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.489442  normal 
 
 
-
 
NC_013501  Rmar_1872  phosphoribosylglycinamide formyltransferase  37.3 
 
 
222 aa  132  1.9999999999999998e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1032  phosphoribosylglycinamide formyltransferase  40.74 
 
 
187 aa  130  1.0000000000000001e-29  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1295  phosphoribosylglycinamide formyltransferase  39.44 
 
 
204 aa  130  1.0000000000000001e-29  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.295392  normal  0.387449 
 
 
-
 
NC_013515  Smon_0052  formyl transferase domain protein  37.57 
 
 
182 aa  130  1.0000000000000001e-29  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_014148  Plim_1759  phosphoribosylglycinamide formyltransferase  36.46 
 
 
214 aa  130  2.0000000000000002e-29  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0657  phosphoribosylglycinamide formyltransferase  37.31 
 
 
188 aa  129  3e-29  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_2208  phosphoribosylglycinamide formyltransferase  41.18 
 
 
224 aa  128  4.0000000000000003e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.128407  n/a   
 
 
-
 
NC_013411  GYMC61_1138  phosphoribosylglycinamide formyltransferase  35.9 
 
 
210 aa  126  2.0000000000000002e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_1778  phosphoribosylglycinamide formyltransferase  38.22 
 
 
192 aa  125  3e-28  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1446  phosphoribosylglycinamide formyltransferase  35.64 
 
 
218 aa  124  7e-28  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2234  phosphoribosylglycinamide formyltransferase  34.74 
 
 
225 aa  124  7e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.364169  normal 
 
 
-
 
NC_013205  Aaci_0218  phosphoribosylglycinamide formyltransferase  34.74 
 
 
206 aa  123  2e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0343  phosphoribosylglycinamide formyltransferase  35.94 
 
 
195 aa  122  3e-27  Bacillus cereus B4264  Bacteria  normal  0.542492  n/a   
 
 
-
 
NC_007575  Suden_1617  Formyl transferase-like  40.91 
 
 
185 aa  122  3e-27  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0522  formyl transferase domain-containing protein  36.56 
 
 
187 aa  122  4e-27  Elusimicrobium minutum Pei191  Bacteria  normal  0.220861  normal  0.682317 
 
 
-
 
NC_007520  Tcr_1045  phosphoribosylglycinamide formyltransferase  35.11 
 
 
214 aa  121  6e-27  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.259794  n/a   
 
 
-
 
NC_006274  BCZK0272  phosphoribosylglycinamide formyltransferase  35.42 
 
 
195 aa  121  7e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0370  phosphoribosylglycinamide formyltransferase  35.42 
 
 
195 aa  121  7e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1281  phosphoribosylglycinamide formyltransferase  34.02 
 
 
195 aa  120  9e-27  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0284  phosphoribosylglycinamide formyltransferase  35.42 
 
 
195 aa  120  9.999999999999999e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0269  phosphoribosylglycinamide formyltransferase  35.42 
 
 
195 aa  120  9.999999999999999e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009360  OSTLU_6266  predicted protein  40.11 
 
 
206 aa  120  9.999999999999999e-27  Ostreococcus lucimarinus CCE9901  Eukaryota  decreased coverage  0.00248936  normal  0.275546 
 
 
-
 
NC_013204  Elen_0726  phosphoribosylglycinamide formyltransferase  35.33 
 
 
206 aa  120  9.999999999999999e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.303566  normal 
 
 
-
 
NC_011773  BCAH820_0329  phosphoribosylglycinamide formyltransferase  35.42 
 
 
195 aa  120  9.999999999999999e-27  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0297  phosphoribosylglycinamide formyltransferase  35.42 
 
 
195 aa  120  9.999999999999999e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0674  phosphoribosylglycinamide formyltransferase  36.22 
 
 
204 aa  120  9.999999999999999e-27  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4977  phosphoribosylglycinamide formyltransferase  35.94 
 
 
195 aa  120  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0276  phosphoribosylglycinamide formyltransferase  35.94 
 
 
195 aa  119  1.9999999999999998e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2062  phosphoribosylglycinamide formyltransferase  38.59 
 
 
219 aa  119  3e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.223849 
 
 
-
 
NC_013171  Apre_1109  formyl transferase domain protein  35.48 
 
 
181 aa  119  3e-26  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0676  phosphoribosylglycinamide formyltransferase  35.68 
 
 
204 aa  118  3.9999999999999996e-26  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0326  phosphoribosylglycinamide formyltransferase  34.9 
 
 
195 aa  118  4.9999999999999996e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0262  phosphoribosylglycinamide formyltransferase  36.08 
 
 
194 aa  118  4.9999999999999996e-26  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0278  phosphoribosylglycinamide formyltransferase  35.42 
 
 
195 aa  118  6e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1292  phosphoribosylglycinamide formyltransferase  35.83 
 
 
218 aa  117  7e-26  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000000519718  n/a   
 
 
-
 
NC_007577  PMT9312_0909  phosphoribosylglycinamide formyltransferase  34.05 
 
 
244 aa  117  9.999999999999999e-26  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2337  phosphoribosylglycinamide formyltransferase  38.59 
 
 
219 aa  117  9.999999999999999e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0764  phosphoribosylglycinamide formyltransferase  35.64 
 
 
203 aa  116  1.9999999999999998e-25  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0053  phosphoribosylglycinamide formyltransferase  37.77 
 
 
184 aa  116  1.9999999999999998e-25  Streptococcus thermophilus LMD-9  Bacteria  normal  0.243956  n/a   
 
 
-
 
NC_008528  OEOE_1130  phosphoribosylglycinamide formyltransferase  32.98 
 
 
195 aa  115  3e-25  Oenococcus oeni PSU-1  Bacteria  hitchhiker  0.00861334  n/a   
 
 
-
 
NC_010725  Mpop_2023  phosphoribosylglycinamide formyltransferase  37.97 
 
 
219 aa  115  3.9999999999999997e-25  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2324  phosphoribosylglycinamide formyltransferase  36.17 
 
 
222 aa  114  6.9999999999999995e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1350  phosphoribosylglycinamide formyltransferase  35.29 
 
 
212 aa  114  7.999999999999999e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3119  phosphoribosylglycinamide formyltransferase  35.29 
 
 
212 aa  114  7.999999999999999e-25  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1233  phosphoribosylglycinamide formyltransferase  35.29 
 
 
212 aa  114  7.999999999999999e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0264  phosphoribosylglycinamide formyltransferase  35.68 
 
 
215 aa  113  2.0000000000000002e-24  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0733  phosphoribosylglycinamide formyltransferase  35.68 
 
 
211 aa  113  2.0000000000000002e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.54904 
 
 
-
 
NC_010117  COXBURSA331_A1929  phosphoribosylglycinamide formyltransferase  35.14 
 
 
215 aa  112  3e-24  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4633  phosphoribosylglycinamide formyltransferase  33.15 
 
 
239 aa  112  3e-24  Trichodesmium erythraeum IMS101  Bacteria  normal  0.614886  normal 
 
 
-
 
NC_008816  A9601_09701  phosphoribosylglycinamide formyltransferase  33.16 
 
 
218 aa  111  5e-24  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0711  phosphoribosylglycinamide formyltransferase  35.14 
 
 
222 aa  111  5e-24  Halorhodospira halophila SL1  Bacteria  normal  0.910177  n/a   
 
 
-
 
NC_010001  Cphy_3468  phosphoribosylglycinamide formyltransferase  33.51 
 
 
207 aa  111  6e-24  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0126  phosphoribosylglycinamide formyltransferase  32.81 
 
 
198 aa  111  8.000000000000001e-24  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0028  phosphoribosylglycinamide formyltransferase  36.36 
 
 
182 aa  110  1.0000000000000001e-23  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3525  phosphoribosylglycinamide formyltransferase  32.98 
 
 
212 aa  109  2.0000000000000002e-23  Serratia proteamaculans 568  Bacteria  normal  0.0302516  normal 
 
 
-
 
NC_013926  Aboo_0482  phosphoribosylglycinamide formyltransferase  34.44 
 
 
313 aa  109  2.0000000000000002e-23  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007519  Dde_2835  phosphoribosylglycinamide formyltransferase  34.03 
 
 
224 aa  110  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_09681  phosphoribosylglycinamide formyltransferase  32.97 
 
 
218 aa  109  2.0000000000000002e-23  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1284  phosphoribosylglycinamide formyltransferase  35.45 
 
 
220 aa  109  3e-23  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_01770  phosphoribosylglycinamide formyltransferase  32.62 
 
 
201 aa  108  3e-23  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02149  phosphoribosylglycinamide formyltransferase  32.09 
 
 
216 aa  108  4.0000000000000004e-23  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0678  phosphoribosylglycinamide formyltransferase  34.57 
 
 
196 aa  108  5e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1888  phosphoribosylglycinamide formyltransferase  33.51 
 
 
197 aa  108  5e-23  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00391405  normal  0.23878 
 
 
-
 
NC_003910  CPS_3197  phosphoribosylglycinamide formyltransferase  34.41 
 
 
213 aa  107  7.000000000000001e-23  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.000983298  n/a   
 
 
-
 
NC_008025  Dgeo_1546  formyl transferase-like protein  44.44 
 
 
190 aa  108  7.000000000000001e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3927  phosphoribosylglycinamide formyltransferase  33.16 
 
 
198 aa  107  9.000000000000001e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1020  phosphoribosylglycinamide formyltransferase  30.85 
 
 
197 aa  107  1e-22  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2997  phosphoribosylglycinamide formyltransferase  32.61 
 
 
214 aa  107  1e-22  Pseudomonas mendocina ymp  Bacteria  normal  0.386914  hitchhiker  0.000268593 
 
 
-
 
NC_009513  Lreu_0143  phosphoribosylglycinamide formyltransferase  30.21 
 
 
190 aa  106  2e-22  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_0319  phosphoribosylglycinamide formyltransferase  32.81 
 
 
232 aa  106  2e-22  Prochlorococcus marinus str. NATL2A  Bacteria  hitchhiker  0.0027967  n/a   
 
 
-
 
NC_012880  Dd703_1063  phosphoribosylglycinamide formyltransferase  33.51 
 
 
212 aa  106  2e-22  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2317  phosphoribosylglycinamide formyltransferase  34.22 
 
 
220 aa  106  2e-22  Magnetococcus sp. MC-1  Bacteria  normal  0.205766  normal  0.80837 
 
 
-
 
NC_007493  RSP_1970  phosphoribosylglycinamide formyltransferase  36.94 
 
 
182 aa  105  3e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_09921  phosphoribosylglycinamide formyltransferase  31.91 
 
 
232 aa  105  3e-22  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.337887 
 
 
-
 
NC_009253  Dred_2363  phosphoribosylglycinamide formyltransferase  32.43 
 
 
203 aa  106  3e-22  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2254  phosphoribosylglycinamide formyltransferase  34.59 
 
 
223 aa  105  4e-22  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.9402  n/a   
 
 
-
 
NC_007516  Syncc9605_1388  phosphoribosylglycinamide formyltransferase  32.61 
 
 
186 aa  105  4e-22  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2101  phosphoribosylglycinamide formyltransferase  33.84 
 
 
207 aa  105  4e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.388501  normal 
 
 
-
 
NC_014212  Mesil_1531  phosphoribosylglycinamide formyltransferase  32.64 
 
 
197 aa  105  4e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  0.468098  normal 
 
 
-
 
NC_010682  Rpic_2722  phosphoribosylglycinamide formyltransferase  34.92 
 
 
216 aa  105  4e-22  Ralstonia pickettii 12J  Bacteria  normal  0.826865  normal 
 
 
-
 
NC_007973  Rmet_2878  phosphoribosylglycinamide formyltransferase  33.69 
 
 
220 aa  105  5e-22  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.446535 
 
 
-
 
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