| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1888 |
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| Symbol | purN |
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| ID | 5712880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1965637 |
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| End bp | 1966230 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267812 |
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| Product | phosphoribosylglycinamide formyltransferase |
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| Protein accession | YP_001533231 |
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| Protein GI | 159044437 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
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| TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00391405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.23878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACCGGAC GCGTCGCGAT CCTGATCTCC GGGGGCGGGT CGAACATGCT GGCTCTGGTG
GACAGCATGA CCGGCGACCA CCCAGCGCGC CCGGTACTCG TGGCCGCCAA CGATCCGCGG
GCAGGGGGGC TGACCAAGGC CGCCCATCGC GGCATTCCCA CCGCCGCCGT GGATCACCGC
CCCTTCAAGG GCGACCGCGC GGGGTTCGAG GCAGCCCTGT CCGAACATCT CGACGCCGCG
GCCCCGGACA TCCTGTGCCT GGCGGGCTTC ATGCGGGTTC TGACCCCGGA ATTCGTCGCC
CGCTGGTCGG GCCGGATTCT CAATATTCAC CCGTCGCTCC TGCCGAAATA CAAGGGCCTG
CACACCCATG CCCGGGCTCT GGAGGCGGGC GATACCCACC ACGGCTGCAC CGTGCACGAG
GTCACGCCCG CCCTCGACGA CGGCCCGATC CTCGGACAGG CCCGGCTGGC CATCGCTCCC
GGCGATACCT CCGAAACCCT CGCCGCCCGG GTCCTGACCC TCGAACACCG CCTCTACCCG
GCGGTCCTGC GCCGCTTCGC TGCCGGCGAC CGCAGCCGGA TCGACCTCGA CTGA
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| Protein sequence | MTGRVAILIS GGGSNMLALV DSMTGDHPAR PVLVAANDPR AGGLTKAAHR GIPTAAVDHR
PFKGDRAGFE AALSEHLDAA APDILCLAGF MRVLTPEFVA RWSGRILNIH PSLLPKYKGL
HTHARALEAG DTHHGCTVHE VTPALDDGPI LGQARLAIAP GDTSETLAAR VLTLEHRLYP
AVLRRFAAGD RSRIDLD
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