Gene Tcr_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1045 
Symbol 
ID3760567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1122359 
End bp1123003 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID637785766 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_391314 
Protein GI78485389 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.259794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTA AAATGCGCAT TGCCGTTTTA ATTTCAGGTA AAGGTTCAAA CCTTCAGGCT 
CTGATCGATC AGGCCAGTCA ATCGCGGTAT GAAATTGGTT TAGTGTTGTC GAACCGCCCA
CATGCTAAAG GCCTTCAAAA AGCTGAAAAA GCAGGTATTC CAACGGCCAT TTTAGATCAC
TCTCAATTTG ATTCACGAGA AGCATTTGAT ACGGCGATGA TCCAAATCAT CGACAGTCAT
AAAATCGAAG CCGTTATTCT CGCGGGCTTT ATGCGCATCC TGACACCTAT CTTTACGGAT
CATTTTTTAG GCAGAATGCT CAACATACAC CCTTCACTTC TTCCTAAATA CCCTGGACTC
AATACCCATC AACGTGCACT AGAAGCACAC GATAAAGAAC ATGGGCTCAG CATTCATTTT
GTCACCTCCG AGCTAGATGG CGGACCGGTC ATTCTTCAGG CAAAAGTGCC AGTCACCCAA
GGCGATACGG TTGACTCTTT ACAGAAAAAG GTACAAGTCC AAGAACACAT CGCTTATCCT
TTAGTGACAA ATTGGCTTGC CAGTGGTGAT TTAATATTTA AAAATAACCA GGCCTGGTAT
AAAAACACCC ATCTTACAAC GCCGATACAA TTAACGGAGC TGTAA
 
Protein sequence
MTTKMRIAVL ISGKGSNLQA LIDQASQSRY EIGLVLSNRP HAKGLQKAEK AGIPTAILDH 
SQFDSREAFD TAMIQIIDSH KIEAVILAGF MRILTPIFTD HFLGRMLNIH PSLLPKYPGL
NTHQRALEAH DKEHGLSIHF VTSELDGGPV ILQAKVPVTQ GDTVDSLQKK VQVQEHIAYP
LVTNWLASGD LIFKNNQAWY KNTHLTTPIQ LTEL