Gene Cpha266_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1978 
Symbol 
ID4570418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2292608 
End bp2293210 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID639766559 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_912415 
Protein GI119357771 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACA GGAAAACCCG TCTTGCTGTA TTCTGTTCCG GAGGAGGCAG CAATTTCCAG 
GCACTGTATC ACGCCATAAA AAGAAAAAAG CTTTCAGCGG AAATCGTTCT CTGCCTGTCA
AACCGCTCCC GATGCGGAGC AATGGAGTTT GCCCGCGAGC ATAAGATCAA GGATGTTCAT
CTTTCGGAGA AACAGTTCCC CTCTTTCGAC GCTTTTACAG AAGCGATGCT TGAAACACTC
CGGAGCAATG AGATTGATCT CATTCTCCTT GCTGGCTACA TGCGCAAAGT TCCCGACGCT
GTAGTAGGAG CTTTTCCGGA AAGAATCCTC AACATCCACC CTGCCCTCTT GCCAAAATTC
GGAGGAGAGG GCATGTACGG GCTGAATGTT CATGCTGCTG TTATCGCTTC AGGCGAAACC
ATCAGCGGAG CAACCGTTCA TCTGGTCAAT GAAGAGTATG ACAAGGGAAG AGTACTCATG
CAGCAAACTG TTCCGGTAAT GCCTGACGAT AGTGCTGAAA AACTGGCTGA GCGTGTTCTT
GCATGTGAGC ACCAGCTCTA TGCCGAAGCT CTTGAAAAGC TGCTGGGAGA ACAGGAAGCA
TGA
 
Protein sequence
MTNRKTRLAV FCSGGGSNFQ ALYHAIKRKK LSAEIVLCLS NRSRCGAMEF AREHKIKDVH 
LSEKQFPSFD AFTEAMLETL RSNEIDLILL AGYMRKVPDA VVGAFPERIL NIHPALLPKF
GGEGMYGLNV HAAVIASGET ISGATVHLVN EEYDKGRVLM QQTVPVMPDD SAEKLAERVL
ACEHQLYAEA LEKLLGEQEA