Gene Paes_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1701 
Symbol 
ID6459502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1857214 
End bp1857816 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content53% 
IMG OID642725689 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_002016366 
Protein GI194334506 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.489442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACC ACAAAACAAA GCTGGCTGTA TTCTGCTCCG GTTCCGGGAC CAACTTCCAG 
GCAATCTTCC ATGCCATCAA TGAACGCAAC CTCCCTGCAG AGGTAGTGCT CTGCGTTTCG
AACCGCTCCG AATGCGGCGC AATGAGCTTT GCCTCTCAAC ATGGCATCGC AACGCTGCAC
ATCTCAGAAA AACAGTATGA AACCCCTGAA AAGTTCGGTG CCGAGATGCT CAAGGCCCTG
GAACAAAACG GAATAGAATA CATCCTCCTG GCCGGCTATC TCAGGAAAGT TCCTTCATCC
GTGGTAGAAG CTTACAGCTA TAAAATGCTC AACATCCACC CTGCGCTGCT GCCAAAGTTC
GGCGGCCCCG GCATGTATGG CATCAATGTG CATAAAGCCG TCCTTGCATC CGGAGAAAAA
GAAACAGGTG CAACCGTCCA CTACGTCGAT GCGGAATACG ACAAAGGCCC CATTCTTCTC
CAGGGACGTG TTCCTGTCAA GTCAGGAGAC ACTCCCGAAT CGCTTGCCGC AAGGGTGCTC
GAATGTGAAC ACCGCCTCTA TCCTGATGCG CTTGAAAAAC TGCTCATCGG CAGCGGGCAA
TGA
 
Protein sequence
MANHKTKLAV FCSGSGTNFQ AIFHAINERN LPAEVVLCVS NRSECGAMSF ASQHGIATLH 
ISEKQYETPE KFGAEMLKAL EQNGIEYILL AGYLRKVPSS VVEAYSYKML NIHPALLPKF
GGPGMYGINV HKAVLASGEK ETGATVHYVD AEYDKGPILL QGRVPVKSGD TPESLAARVL
ECEHRLYPDA LEKLLIGSGQ