Gene Pden_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3927 
Symbol 
ID4582478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1063681 
End bp1064277 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content71% 
IMG OID639771236 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_917689 
Protein GI119386634 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCG TCGCCATCCT GATCTCGGGC GGCGGCTCGA ACATGGTCAA GCTGGTCGAA 
TCCATGACCG GCACGCATCC CGCGCGGCCG GTCGTCGTCG GCTCGAACGA TCCGCAGGCA
GCGGGCCTTG CCCGGGCGCA AGCCATGGGC GTGCCGAGCT TCGCCATCGA CCACCGGGCC
TATCCCGGCG ACCGCGCGGG CTTCGAGGCA GCGCTGCTGG AACCCCTGCT GGCCGCGCAG
CCCGACATCC TGTGCCTTGC CGGCTTCATG CGTATCCTGA CCCCGGACTT CGTGCAGCGG
TTCGAGGGCC GGATGCTGAA CATCCACCCC TCGCTCCTGC CGAAATATCC GGGCTTGCAT
ACGCATCAGC GCGCCATCGA CGCCGGCGAT GCCGAGGCCG GGGCCAGCGT GCACCTGGTC
ACGCCGGAAC TCGACGCCGG CCCGATCCTC GGCCAGGCCC GCGTGCCGGT CCTGCCCGGC
GATACGGCCG AGACGCTGGC CGCCCGCGTG CTGACCCAGG AACACCGGCT CTATCCCCAG
GTGCTGCGCC GTTTCGCGCA GGGCGACCTG ACGCCGATCA CCCTCACCGC GGCGTGA
 
Protein sequence
MKRVAILISG GGSNMVKLVE SMTGTHPARP VVVGSNDPQA AGLARAQAMG VPSFAIDHRA 
YPGDRAGFEA ALLEPLLAAQ PDILCLAGFM RILTPDFVQR FEGRMLNIHP SLLPKYPGLH
THQRAIDAGD AEAGASVHLV TPELDAGPIL GQARVPVLPG DTAETLAARV LTQEHRLYPQ
VLRRFAQGDL TPITLTAA