More than 300 homologs were found in PanDaTox collection
for query gene Bfae_28250 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_28250  dTDP-glucose pyrophosphorylase  100 
 
 
263 aa  513  1e-144  Brachybacterium faecium DSM 4810  Bacteria  normal  0.682184  n/a   
 
 
-
 
NC_013385  Adeg_0258  glucose-1-phosphate thymidyltransferase  33.2 
 
 
356 aa  112  8.000000000000001e-24  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0065  glucose-1-phosphate thymidyltransferase  31.15 
 
 
355 aa  103  4e-21  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0065  glucose-1-phosphate thymidyltransferase  31.15 
 
 
355 aa  103  4e-21  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1687  glucose-1-phosphate thymidyltransferase  33.46 
 
 
356 aa  99.4  5e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1800  glucose-1-phosphate thymidyltransferase  30.67 
 
 
357 aa  99  6e-20  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0954  glucose-1-phosphate thymidyltransferase  32.55 
 
 
354 aa  99  8e-20  Methanosaeta thermophila PT  Archaea  normal  0.526326  n/a   
 
 
-
 
NC_013216  Dtox_2860  glucose-1-phosphate thymidyltransferase  30.62 
 
 
355 aa  95.9  6e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5787  glucose-1-phosphate thymidyltransferase  35.02 
 
 
358 aa  95.9  7e-19  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.189117 
 
 
-
 
NC_013161  Cyan8802_0493  glucose-1-phosphate thymidyltransferase  31.37 
 
 
357 aa  95.1  1e-18  Cyanothece sp. PCC 8802  Bacteria  normal  0.79936  normal  0.265363 
 
 
-
 
NC_011726  PCC8801_0480  glucose-1-phosphate thymidyltransferase  31.37 
 
 
357 aa  94.7  1e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_1450  glucose-1-phosphate thymidyltransferase  30.57 
 
 
376 aa  94  2e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3356  glucose-1-phosphate thymidylyltransferase, short form  29.23 
 
 
358 aa  93.2  4e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.971675  normal  0.216053 
 
 
-
 
NC_013124  Afer_0733  glucose-1-phosphate thymidyltransferase  33.78 
 
 
355 aa  93.2  4e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1488  glucose-1-phosphate thymidyltransferase  27.41 
 
 
357 aa  92.8  5e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000000150762 
 
 
-
 
NC_014212  Mesil_2794  glucose-1-phosphate thymidyltransferase  32.74 
 
 
354 aa  91.7  1e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.181075 
 
 
-
 
NC_008312  Tery_1537  glucose-1-phosphate thymidyltransferase  28.02 
 
 
364 aa  92  1e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.307864 
 
 
-
 
NC_009440  Msed_1845  glucose-1-phosphate thymidyltransferase  29.48 
 
 
349 aa  90.5  3e-17  Metallosphaera sedula DSM 5348  Archaea  normal  0.0548966  normal 
 
 
-
 
NC_008531  LEUM_1423  glucose-1-phosphate thymidylyltransferase  30.49 
 
 
291 aa  90.5  3e-17  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0747  glucose-1-phosphate thymidyltransferase  30.12 
 
 
359 aa  89.7  4e-17  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4297  glucose-1-phosphate thymidyltransferase  28.52 
 
 
357 aa  88.6  9e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5901  glucose-1-phosphate thymidyltransferase  33.07 
 
 
356 aa  88.6  9e-17  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1383  glucose-1-phosphate thymidyltransferase  29.18 
 
 
355 aa  87  3e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0713  glucose-1-phosphate thymidyltransferase  32.95 
 
 
358 aa  86.7  3e-16  Frankia sp. CcI3  Bacteria  normal  normal  0.974379 
 
 
-
 
NC_007794  Saro_3238  glucose-1-phosphate thymidylyltransferase  32.31 
 
 
301 aa  85.9  7e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2143  glucose-1-phosphate thymidyltransferase  30.13 
 
 
357 aa  85.9  7e-16  Halorhabdus utahensis DSM 12940  Archaea  normal  0.591307  n/a   
 
 
-
 
NC_013202  Hmuk_1214  glucose-1-phosphate thymidyltransferase  28.52 
 
 
357 aa  85.5  8e-16  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013926  Aboo_0280  Nucleotidyl transferase  29.63 
 
 
400 aa  84.7  0.000000000000001  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_013946  Mrub_2034  glucose-1-phosphate thymidyltransferase  31 
 
 
357 aa  84.7  0.000000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2065  Nucleotidyl transferase  32.73 
 
 
393 aa  84  0.000000000000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2377  glucose-1-phosphate thymidylyltransferase  29.73 
 
 
299 aa  83.2  0.000000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.217402  hitchhiker  0.000893073 
 
 
-
 
NC_009051  Memar_2230  nucleotidyl transferase  32.67 
 
 
383 aa  82.8  0.000000000000005  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_013521  Sked_09040  Glucose-1-phosphate thymidylyltransferase  28.2 
 
 
292 aa  82.4  0.000000000000008  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.00724889  normal  0.162392 
 
 
-
 
NC_008528  OEOE_1449  glucose-1-phosphate thymidylyltransferase  28.36 
 
 
291 aa  81.3  0.00000000000001  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1817  glucose-1-phosphate thymidyltransferase  29.3 
 
 
355 aa  81.6  0.00000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_3048  Nucleotidyl transferase  31.9 
 
 
393 aa  80.5  0.00000000000002  Natrialba magadii ATCC 43099  Archaea  normal  0.916197  n/a   
 
 
-
 
NC_009715  CCV52592_0305  glucose-1-phosphate thymidylyltransferase  28.32 
 
 
294 aa  80.9  0.00000000000002  Campylobacter curvus 525.92  Bacteria  normal  0.132763  n/a   
 
 
-
 
NC_009767  Rcas_1214  glucose-1-phosphate thymidyltransferase  28.74 
 
 
355 aa  81.3  0.00000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.383113  normal 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  29.33 
 
 
289 aa  81.3  0.00000000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_008578  Acel_0413  glucose-1-phosphate thymidyltransferase  31.4 
 
 
355 aa  81.3  0.00000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0183855  normal 
 
 
-
 
NC_009523  RoseRS_4128  glucose-1-phosphate thymidyltransferase  28.74 
 
 
355 aa  80.5  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.0631243  normal 
 
 
-
 
NC_013158  Huta_1140  Nucleotidyl transferase  28.57 
 
 
247 aa  79.7  0.00000000000004  Halorhabdus utahensis DSM 12940  Archaea  normal  0.497469  n/a   
 
 
-
 
NC_009635  Maeo_0379  glucose-1-phosphate thymidylyltransferase  25.95 
 
 
292 aa  79.7  0.00000000000004  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_1202  Nucleotidyl transferase  31.03 
 
 
393 aa  79.7  0.00000000000005  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009712  Mboo_0254  nucleotidyl transferase  29.86 
 
 
399 aa  79.3  0.00000000000006  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_013223  Dret_0153  glucose-1-phosphate thymidylyltransferase  31.22 
 
 
358 aa  79  0.00000000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.34957 
 
 
-
 
NC_008541  Arth_2688  glucose-1-phosphate thymidylyltransferase  25.1 
 
 
287 aa  79  0.00000000000007  Arthrobacter sp. FB24  Bacteria  normal  0.0105243  n/a   
 
 
-
 
NC_011894  Mnod_5509  glucose-1-phosphate thymidylyltransferase  28.12 
 
 
296 aa  79  0.00000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6491  dTDP-glucose pyrophosphorylase-like protein  32.42 
 
 
355 aa  78.2  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_1315  glucose-1-phosphate thymidylyltransferase  25.89 
 
 
291 aa  78.2  0.0000000000001  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0303  glucose-1-phosphate thymidylyltransferase  27.56 
 
 
298 aa  78.2  0.0000000000001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_1801  Nucleotidyl transferase  27.03 
 
 
403 aa  77.4  0.0000000000002  Sulfolobus solfataricus 98/2  Archaea  normal  0.0230412  n/a   
 
 
-
 
NC_009051  Memar_0205  nucleotidyl transferase  29.53 
 
 
262 aa  77  0.0000000000002  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_013159  Svir_03410  Glucose-1-phosphate thymidylyltransferase  30.63 
 
 
293 aa  77.8  0.0000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0401967  normal 
 
 
-
 
NC_011886  Achl_2410  glucose-1-phosphate thymidylyltransferase  25.47 
 
 
290 aa  77.4  0.0000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.140851 
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  28.05 
 
 
293 aa  77.4  0.0000000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_009040  Rsph17029_4076  glucose-1-phosphate thymidylyltransferase  28.8 
 
 
296 aa  77.4  0.0000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0532179  normal  0.23652 
 
 
-
 
NC_009007  RSP_3848  glucose-1-phosphate thymidylyltransferase  28.8 
 
 
296 aa  77.4  0.0000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0628  glucose-1-phosphate thymidyltransferase  28.89 
 
 
358 aa  77  0.0000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.437993  normal  0.532658 
 
 
-
 
NC_013235  Namu_4180  glucose-1-phosphate thymidylyltransferase  30.18 
 
 
293 aa  76.3  0.0000000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  0.112992  normal 
 
 
-
 
NC_012028  Hlac_2874  Nucleotidyl transferase  33.47 
 
 
402 aa  76.6  0.0000000000004  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013595  Sros_0631  dTDP-glucose pyrophosphorylase-like protein  31.76 
 
 
355 aa  76.6  0.0000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_13103  glucose-1-phosphate thymidylyltransferase  25.53 
 
 
286 aa  76.6  0.0000000000004  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2349  glucose-1-phosphate thymidylyltransferase  27.82 
 
 
290 aa  76.3  0.0000000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0181385  hitchhiker  0.00000600969 
 
 
-
 
NC_009712  Mboo_1752  glucose-1-phosphate thymidylyltransferase  27.69 
 
 
297 aa  75.9  0.0000000000006  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.2486 
 
 
-
 
NC_014158  Tpau_3472  glucose-1-phosphate thymidylyltransferase  28.38 
 
 
291 aa  75.5  0.0000000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.483164  n/a   
 
 
-
 
NC_009975  MmarC6_0591  glucose-1-phosphate thymidylyltransferase  27.59 
 
 
291 aa  75.9  0.0000000000007  Methanococcus maripaludis C6  Archaea  normal  0.600436  n/a   
 
 
-
 
NC_008345  Sfri_2758  glucose-1-phosphate thymidylyltransferase  27.55 
 
 
295 aa  75.9  0.0000000000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.36633  n/a   
 
 
-
 
NC_006368  lpp0826  glucose-1-phosphate thymidylyltransferase  27.23 
 
 
291 aa  75.5  0.0000000000008  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0797  glucose-1-phosphate thymidylyltransferase  27.23 
 
 
291 aa  75.5  0.0000000000008  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  29.39 
 
 
293 aa  75.5  0.0000000000008  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_008698  Tpen_1829  nucleotidyl transferase  29.18 
 
 
299 aa  75.5  0.0000000000008  Thermofilum pendens Hrk 5  Archaea  normal  0.343974  n/a   
 
 
-
 
NC_013922  Nmag_0920  Nucleotidyl transferase  31.19 
 
 
391 aa  74.7  0.000000000001  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007641  Rru_B0048  glucose-1-phosphate thymidylyltransferase  29.78 
 
 
294 aa  75.1  0.000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.231271  n/a   
 
 
-
 
NC_008261  CPF_0597  glucose-1-phosphate thymidylyltransferase  28 
 
 
293 aa  75.1  0.000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.290033  n/a   
 
 
-
 
NC_010172  Mext_2395  glucose-1-phosphate thymidylyltransferase  28.18 
 
 
296 aa  74.7  0.000000000001  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.737045 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  29.82 
 
 
294 aa  73.9  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_010172  Mext_3693  glucose-1-phosphate thymidylyltransferase  28.05 
 
 
289 aa  73.9  0.000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.701903  normal 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  29.2 
 
 
293 aa  73.9  0.000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_008261  CPF_0479  glucose-1-phosphate thymidylyltransferase  28 
 
 
293 aa  73.9  0.000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.778561  n/a   
 
 
-
 
NC_011757  Mchl_2672  glucose-1-phosphate thymidylyltransferase  28.18 
 
 
296 aa  73.9  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00250825  normal 
 
 
-
 
NC_008553  Mthe_1181  nucleotidyl transferase  28.63 
 
 
246 aa  74.3  0.000000000002  Methanosaeta thermophila PT  Archaea  normal  0.0563368  n/a   
 
 
-
 
NC_011757  Mchl_4001  glucose-1-phosphate thymidylyltransferase  28.18 
 
 
294 aa  74.3  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1450  glucose-1-phosphate thymidylyltransferase  28.32 
 
 
306 aa  73.6  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2354  glucose-1-phosphate thymidylyltransferase  28.64 
 
 
296 aa  73.6  0.000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  28.73 
 
 
293 aa  73.6  0.000000000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  28.25 
 
 
297 aa  73.9  0.000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2945  Nucleotidyl transferase  28.08 
 
 
248 aa  73.9  0.000000000003  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010725  Mpop_4255  glucose-1-phosphate thymidylyltransferase  28.64 
 
 
296 aa  73.6  0.000000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5841  glucose-1-phosphate thymidylyltransferase  28.57 
 
 
286 aa  73.2  0.000000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.572504 
 
 
-
 
NC_007796  Mhun_3075  glucose-1-phosphate thymidylyltransferase  26.84 
 
 
293 aa  73.2  0.000000000004  Methanospirillum hungatei JF-1  Archaea  normal  0.589168  normal  0.11788 
 
 
-
 
NC_013093  Amir_6654  glucose-1-phosphate thymidylyltransferase  29.55 
 
 
292 aa  73.2  0.000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.147178  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  29.49 
 
 
291 aa  73.2  0.000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5838  glucose-1-phosphate thymidylyltransferase  28.32 
 
 
295 aa  73.2  0.000000000004  Methylobacterium sp. 4-46  Bacteria  normal  0.494959  normal  0.263713 
 
 
-
 
NC_013757  Gobs_4306  glucose-1-phosphate thymidylyltransferase  29.39 
 
 
290 aa  72.8  0.000000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.204948  n/a   
 
 
-
 
NC_007355  Mbar_A2020  glucose-1-phosphate thymidylyltransferase  24.9 
 
 
397 aa  72.8  0.000000000006  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.611525 
 
 
-
 
NC_009953  Sare_2096  glucose-1-phosphate thymidyltransferase  33.52 
 
 
353 aa  72.8  0.000000000006  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00805861 
 
 
-
 
NC_013172  Bfae_02720  Glucose-1-phosphate thymidylyltransferase  28.79 
 
 
307 aa  72.4  0.000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1570  dTDP-glucose pyrophosphorylase  27.8 
 
 
298 aa  72.8  0.000000000006  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0340  glucose-1-phosphate thymidyltransferase  30.57 
 
 
355 aa  72.8  0.000000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.830656  normal  0.0393179 
 
 
-
 
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