Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2020 |
Symbol | |
ID | 3627837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2552095 |
End bp | 2553288 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700898 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_305534 |
Protein GI | 73669519 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.611525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGG TTGTCCTTGT AGCAGGCAAA GGCACAAGGA TGGAACCTCT AACTTCCGGC TGTCCTAAAG TTATGCTCCA GGTTGCAAAT AAACCCATCC TCGAACATAT ACTTAATTCA GCCATCGAAG CAGGCATCGA AGGCTTTGTC TTCATTACCG GTTATCTCGA AAAGCAGATA AAAGAGTACT TCGGGGACGG AAACAAATGG GGAGTAAGCA TAGAGTATGT ACAGCAAAAG GAGCAGCTAG GGACTGCAAA TGCGATAGGC TGTGCAAAAG GCTATGTTGA TGGGACTTTC CTTGTACTTA ACGGGGATAT GCTCATAGAG CAGGAGGACT TAAAAGCCCT GGTCTCAAGG ACAGAAGAAG CTGTCATCTG TGTAAAAGAG GTGGAAAACC CGGCGGATTT CGGAGTGCTT GAAACCGAGA ATAATAGAGT TGTCAGGATA ATAGAAAAAC CTAAAAATCC CCCTACTAAC CTTGCAAATG CCGGGATATA TCTTTTCAGG GAATCTATTT TTGACTTTAT TGACAGAACC AAGGCCTCAG TGAGAAATGA GTTCGAGATT ACGGACTCCA TCCAGATGCT GATTGATAGT GGAACAGCCG TGGGTTACAG CCCTCTCGAA GGTAGATGGA TAGATATAGG GTATCCCTGG GACCTCTTGA AAGCAAACGA ATACCTTCTG AAAGGCCTTA AGAGCAGCTG TGAAGGTACT GTAGAGCCGA ATGCTACCAT AAAAGGAGAG GTTGTAATCG GAAAAGGCAC TATTATCAGG AACGGTTCTT ATATCGAAGG CCCAGTAGTG ATAGGAGAGA ATTGCGATAT CGGGCCTAAT TGTTTTATCC GCCCTTCCAC TGCAATCGGG AACCATATTA GGGTAGGAAA TGCTGTGGAG ATAAAAAATA CGATTGTCAT GGAAGATACT CATGTGGGAC ATCTGAGTTA TGTTGGGGAC AGCATTATTG GGCACCACTG CAACTTTGGA GCGGGTACGA AAGTTGCAAA CCTCCGCCAT GATGGGAAAA ACATAAAAGT AATGATAAAA AGCAGGATTC TTGACACGGG CAGGAGAAAA CTCGGAGTGA TTATGGGAGA TGACGTGCAT ACCGGTATCA ACACAAGCAT AAATATCGGT ACGATAATGG AAAAAGGAAG ATATACATAT CCTGGAGAGA TTGTCAAACA TTAA
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Protein sequence | MKAVVLVAGK GTRMEPLTSG CPKVMLQVAN KPILEHILNS AIEAGIEGFV FITGYLEKQI KEYFGDGNKW GVSIEYVQQK EQLGTANAIG CAKGYVDGTF LVLNGDMLIE QEDLKALVSR TEEAVICVKE VENPADFGVL ETENNRVVRI IEKPKNPPTN LANAGIYLFR ESIFDFIDRT KASVRNEFEI TDSIQMLIDS GTAVGYSPLE GRWIDIGYPW DLLKANEYLL KGLKSSCEGT VEPNATIKGE VVIGKGTIIR NGSYIEGPVV IGENCDIGPN CFIRPSTAIG NHIRVGNAVE IKNTIVMEDT HVGHLSYVGD SIIGHHCNFG AGTKVANLRH DGKNIKVMIK SRILDTGRRK LGVIMGDDVH TGINTSINIG TIMEKGRYTY PGEIVKH
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