Gene M446_5838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5838 
Symbol 
ID6130084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6416977 
End bp6417864 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID641645945 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001772559 
Protein GI170743904 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.494959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.263713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGG GCATCGTGCT CGCCGGCGGC TCCGGCACCC GACTCCACCC GGCGACGCTC 
GCGATCAACA AGCAGCTGCT GCCGGTCTAC GACAAGCCGA TGATCTACTA TCCGGTCTCG
GTGCTGATGC TGGCCGGGAT CCGCGAGATC CTGATCATCT CGAGCCCCGA GCACCTGGAC
AATTACAAGC GGCTGTTCGG GACGGGCGAG CAGTTCGGGG TGACCTTCTC GTACGCGCTG
CAGCCGCGGC CGGAGGGGCT GGCGCAGGCC TTCCTGATCG GGCGGGACTT CGTCGGCGCG
GACCCAGTCT CGCTGATCCT GGGCGACAAC CTGTTCTTCG GGGCGGGCCT GCGGGCCCTG
CTGCAGCGGG CGCGGGCGCG GGCGCGGGGA GCGACGGTGT TCGCCTACCA CGTCGACCAC
CCGGAGGCCT ACGGGGTGGT GAACCTCGAC GGCTCGGGCC GCCCGACCAA GCTGGTCGAG
AAGCCGAAAC TGCCGGAATC GACCTGGGCG GTGACCGGCC TGTACTTCTA CGACAACCAA
GTGCTCGACA TCGCGGCGGC CGTGAAACCC TCGCCGCGGG GCGAGCTGGA GATCACGGAC
GTGAACCAGG CCTACCTGGA GCGCGGGCAG CTCGAGGTGG AATGCATGTC GCGCGGCTAC
GCGTGGCTGG ACACGGGAAC GCATGACAGC CTGCTGGAGG CGGGGGAGTT CGTGCGGGTG
ATCCAGAGCC GGCAGGGGAT GCAGGTGGCC TGCCTGGAGG AGATCGCCTA CCTGCAGGGC
TGGATCTCCC GCGAGCAGGT GGCGGCGCGC GGCGACCTCT TCGCCAAGAC GAATTACGGC
CAGTACCTGC TGCGCCTCGC CCGCCAGGAG ACGCACGCGG GCTATTGA
 
Protein sequence
MMKGIVLAGG SGTRLHPATL AINKQLLPVY DKPMIYYPVS VLMLAGIREI LIISSPEHLD 
NYKRLFGTGE QFGVTFSYAL QPRPEGLAQA FLIGRDFVGA DPVSLILGDN LFFGAGLRAL
LQRARARARG ATVFAYHVDH PEAYGVVNLD GSGRPTKLVE KPKLPESTWA VTGLYFYDNQ
VLDIAAAVKP SPRGELEITD VNQAYLERGQ LEVECMSRGY AWLDTGTHDS LLEAGEFVRV
IQSRQGMQVA CLEEIAYLQG WISREQVAAR GDLFAKTNYG QYLLRLARQE THAGY