Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3356 |
Symbol | |
ID | 3680154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4175875 |
End bp | 4176951 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637718706 |
Product | glucose-1-phosphate thymidylyltransferase, short form |
Protein accession | YP_323858 |
Protein GI | 75909562 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.971675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.216053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAC TAATTCTCTC TGGCGGTAGA GGTACACGTC TACGTCCACT CACCTATACT GGAGCAAAGC AACTTGTCCC AGTTGCGAAC AAACCTATTC TATGGTATGG GATTGAAGAA ATGGTTGCGG CTGGTATTAC TGATATCGGT ATAATTATCA GCCCAGAAAC AGGGGCAGAA GTACAAAGTA AAACTGGAGA TGGAAAACTT TTTGGAGCGA ACATCACCTA TATTTTACAA GAACAACCGG CCGGTCTAGC TCATGCCGTT ACTGTTGCTC GTCCCTTCTT AAAAGATTCA CCTTTTGTCA TGTATCTGGG GGATAACCTA ATTCAACAAG GAGACTTAAG CAACTTTTTA CAACAGTTTA TCCAAGAACA ACCTGATGCT TTAATTCTCT TGCGTGAGGT TATCAACCCT AGCGCCTTTG GTGTAGCTAA GGTGGATGAT ACCGGGCGAG TACTACAATT AATCGAAAAA CCCAAAGTTC CTCCATCCAA TCTAGCTCTA GTAGGGGTTT ATTTCTTTTC CCCGATTATT CATGATTCTA TTGCTCGTAT CCAGCCTTCA AACCGAGGAG AACTGGAAAT TACTGATGCT ATTCAACGCT TAATAGACGA TAAAAGACAA GTATTAGCTT GTAATTTATA TGGTTGGTGG TTAGACACTG GTAAAAAAGA TGATTTATTA GAAGCTAACC GCTTAATTCT TGATACCTGT TTAACAACGT CTAACTTAGG GGAAGTGGAT GCTAAAAGTC AAATCATTGG ACGAGTTCAA ATTGGAGTCA ATTCCCAAAT CATCAATTGT ACAATACGTG GCCCCGTGGT TATTGGCGAT AATTGTTATT TAGAAAATTG CTTTATTGGC CCTTATAGCA GCATCGCCAA CAATACAACA CTCATCGACT CAGATTTAGA ACACAGCGTA ATTTTAGAAG GTGCTAAAAT ATCCGGAATC GATCAGCGAA TCATTGATAG TGTAATTGGA CAACGCGCGC AACTAACAAT TGCTCCCCGT CGCCCAAAAG CATTACGCTT TTTGATTGGT GATGATTGTC AAATAGAACT GACATAA
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Protein sequence | MKALILSGGR GTRLRPLTYT GAKQLVPVAN KPILWYGIEE MVAAGITDIG IIISPETGAE VQSKTGDGKL FGANITYILQ EQPAGLAHAV TVARPFLKDS PFVMYLGDNL IQQGDLSNFL QQFIQEQPDA LILLREVINP SAFGVAKVDD TGRVLQLIEK PKVPPSNLAL VGVYFFSPII HDSIARIQPS NRGELEITDA IQRLIDDKRQ VLACNLYGWW LDTGKKDDLL EANRLILDTC LTTSNLGEVD AKSQIIGRVQ IGVNSQIINC TIRGPVVIGD NCYLENCFIG PYSSIANNTT LIDSDLEHSV ILEGAKISGI DQRIIDSVIG QRAQLTIAPR RPKALRFLIG DDCQIELT
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