24 homologs were found in PanDaTox collection
for query gene BBta_6916 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_6916  hypothetical protein  100 
 
 		 420 aa  853    Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.633643 
 
 
-
 
NC_009485  BBta_6523  TRAP-type uncharacterized transporter domain-containing protein  45.45 
 
 		 387 aa  327  2.0000000000000001e-88  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_0245  TRAP-type uncharacterized transporter domain-containing protein  33.24 
 
 		 391 aa  225  1e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0064  hypothetical protein  34.47 
 
 		 363 aa  223  4e-57  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.257348 
 
 
-
 
NC_010172  Mext_3808  hypothetical protein  33.61 
 
 		 367 aa  221  9.999999999999999e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.312034  normal  1 
 
 
-
 
NC_011757  Mchl_0224  hypothetical protein  33.61 
 
 		 367 aa  221  9.999999999999999e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_5709  hypothetical protein  32.07 
 
 		 381 aa  208  2e-52  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00407946 
 
 
-
 
NC_010511  M446_3556  hypothetical protein  32.56 
 
 		 387 aa  208  2e-52  Methylobacterium sp. 4-46  Bacteria  normal  0.961167  normal  0.112141 
 
 
-
 
NC_009485  BBta_7227  hypothetical protein  34.96 
 
 		 391 aa  206  5e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.725548  normal  1 
 
 
-
 
NC_011894  Mnod_0528  hypothetical protein  32.38 
 
 		 387 aa  204  2e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6514  TRAP-type uncharacterized transporter domain-containing protein  31.28 
 
 		 361 aa  201  1.9999999999999998e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0948459  normal  1 
 
 
-
 
NC_010511  M446_5576  hypothetical protein  34.87 
 
 		 423 aa  194  3e-48  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_2296  TRAP-type uncharacterized transport system periplasmic component-like protein  32.6 
 
 		 370 aa  177  3e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1321  TRAP-type uncharacterized transport system periplasmic component-like protein  33.77 
 
 		 362 aa  157  4e-37  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.107503 
 
 
-
 
NC_009050  Rsph17029_4032  TRAP transporter solute receptor TAXI family protein  25.57 
 
 		 348 aa  89.4  1e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0151449  normal  0.772934 
 
 
-
 
NC_007494  RSP_3299  TRAP-T family transporter periplasmic binding component  25.57 
 
 		 348 aa  89.4  1e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.783922  n/a   
 
 
-
 
NC_010623  Bphy_3359  TRAP transporter solute receptor TAXI family protein  22.29 
 
 		 366 aa  87.4  5e-16  Burkholderia phymatum STM815  Bacteria  normal  0.767293  hitchhiker  0.000000000800909 
 
 
-
 
NC_009429  Rsph17025_3295  KDPG and KHG aldolase  25.16 
 
 		 349 aa  86.7  7e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.122481  normal  0.808807 
 
 
-
 
NC_010676  Bphyt_4887  TRAP transporter solute receptor, TAXI family  22.26 
 
 		 358 aa  82  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0373897  normal  0.393187 
 
 
-
 
NC_007952  Bxe_B1781  hypothetical protein  21.84 
 
 		 357 aa  80.1  0.00000000000007  Burkholderia xenovorans LB400  Bacteria  normal  0.568147  unclonable  0.000000000964145 
 
 
-
 
NC_009952  Dshi_1924  putative TRAP transporter solute receptor  24 
 
 		 350 aa  69.3  0.0000000001  Dinoroseobacter shibae DFL 12  Bacteria  hitchhiker  0.00617183  hitchhiker  0.0000000000275167 
 
 
-
 
NC_008789  Hhal_0358  TRAP transporter solute receptor TAXI family protein  28.43 
 
 		 325 aa  52.4  0.00002  Halorhodospira halophila SL1  Bacteria  normal  0.0105489  n/a   
 
 
-
 
NC_013595  Sros_1537  hypothetical protein  26.25 
 
 		 318 aa  46.2  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.391308  normal  0.296954 
 
 
-
 
NC_009456  VC0395_1133  immunogenic protein  23.13 
 
 		 351 aa  44.3  0.004  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
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