Gene BBta_7227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7227 
Symbol 
ID5156019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7588377 
End bp7589552 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content65% 
IMG OID640561900 
Producthypothetical protein 
Protein accessionYP_001243011 
Protein GI148258426 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.725548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCGTG TCGCGCGTGC CGTTGTTGGC GTCTTCGTCT CTACATTCGG CCTCCTATCC 
TTCGTGACGT TTTCCGGCAA CGCCGCAGCA CAGCAAGCGC AACAGCACCG GCCGCCGCCG
GCCAATGCGG CCGTGGTCGG CAATCTCCCG GACCGCGAGG CGCTGAACTC CGGCACCGTG
ACCGTCATCA CCGCGCCGAT CGGCGGTCCG ATGTCGGTGA TGGGCTCCGA CATGGCGGCG
GTGCTCGACG AAGGCGAGAA CCTGCGCGTC CTGCCGATCC TCGGCAAGGG ATCGGCGCAG
AACCTCGTCG ACATCATCAT GTTGAAGAAC ATCGACATGG GCTTCGTCGC CACCGACGCG
CTGGAATTCG TCAAGACGGA ATATAACATC CCGGACATTG CCCAGCGCGT GCGCTACATC
GCGCAGCTCT TCCATAACGA CGTCCACATT GTCGCGCGGC GCGAGATCCG CAGCCTGCAG
GACCTCAACG GAAGGCGCGT GTTCGCCGAG CGCTCGATCG GCCTGCCAGC GGCGCGGACG
ATCTTCCGCC GGCTCGGCAT CCAGGCCGAG ATCGATTCGC AGACCGATCC GACCGGGGGT
CTGCAGAAGC TGATCGACGG CCAGGGCGAC GCCTGGATCG CCTCGGTGTC GAAGGACGCC
CCCGTCATCA AGGGCATCAA GAATGAGGGG GGACGGCTGC ATTTGCTGCC CGTGCCCTAC
GACCGCGCAT TGCAGGACAT TTACCTGCCG ACGACATTCT CGTCCGAGGA ATATCCGAAT
CTGGTGCCGG CCGGGACCAA GGTCGACGCG GTCGCAGCCT CGACCGTGCT GATGGTCTAC
AACTGGCCCG AAGGAAGCGA GCGCTACCGC CGCACGGCGA GGTTTGTCGA TGCGCTGTTC
GGCAAGATCC AGGTGTTGCA GTCGCCACCG CGGCATCCGA AATGGCGCGA CACCGTCCTA
TCCGCGCCGG TGTCGGGGCT GATCCGCTTC AAGGCTGCGC AGGACTGGCT CGACGGCGTA
GGCCGGATGC AGTCGCCGGC GGAGGACCAG CGCACGCCAG CGGAATTCCG CAAATTTCTC
GACGAGCGCA AGACACAGGC GCGCATGTCG ACGGACGAGG CGGCGCGGCT CTATAGCGAC
TTTCTGAAAT GGCAGCGGAG CAAGGAGACG CGCTGA
 
Protein sequence
MNRVARAVVG VFVSTFGLLS FVTFSGNAAA QQAQQHRPPP ANAAVVGNLP DREALNSGTV 
TVITAPIGGP MSVMGSDMAA VLDEGENLRV LPILGKGSAQ NLVDIIMLKN IDMGFVATDA
LEFVKTEYNI PDIAQRVRYI AQLFHNDVHI VARREIRSLQ DLNGRRVFAE RSIGLPAART
IFRRLGIQAE IDSQTDPTGG LQKLIDGQGD AWIASVSKDA PVIKGIKNEG GRLHLLPVPY
DRALQDIYLP TTFSSEEYPN LVPAGTKVDA VAASTVLMVY NWPEGSERYR RTARFVDALF
GKIQVLQSPP RHPKWRDTVL SAPVSGLIRF KAAQDWLDGV GRMQSPAEDQ RTPAEFRKFL
DERKTQARMS TDEAARLYSD FLKWQRSKET R