Gene M446_5576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5576 
Symbol 
ID6133386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6113534 
End bp6114805 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID641645701 
Producthypothetical protein 
Protein accessionYP_001772315 
Protein GI170743660 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGCA AAACTCGGAC AACGGGATTG ATGGCCCTCG CCGTCTCAGC CCTCCTGCTG 
GCTGGCGTAC CCTGCTCCCC GGCAGGCGCG CGGGATACCT CCCAAGCCGC GGGCGCGTCC
CAGGCCGCAG GGAAGCAGGC CGTATTGTCG GCCGGCGAGA CGGAGCATGC GATCGGTAAA
CGCATGAACG CCGCAACCGT CTCGGTTGTC ACCGGCACGC CTGGAGGAAC CTACTTCCGT
GTCGGAGCGG ACCTGGCCTT CGTCCTTGAC GACGAGCGCC TGCGCGTCCT GCCCATGCTG
GGCAAGGGGG CGGGCCAGAA CGCCTACGAT CTCCGGTTCC TGAAGGGCGT CGACCTCGCC
TTTCTGCGCA CCGACACGCA GGAGCAGTTG CGCGAAGACA AGCGCCTCGC CAGCATCGCG
CCGCATATCC GCTACATCGC AAAGCTGTTC GACGACGAGC TGCATATCAT CGGTCCGAAC
AGCGTCACGG AGGCGCGGCA GCTCGCGGGC AAGCGGGTGA CCTTCGACGT CAAGGGCAGC
GGCACCGATT ACAGCGGCCG GGCGATGTTC CGGAACCTCG GCGTCACCGT GCAGGCGATC
AATGTCGACC AACCGACCGC CTTCGAGATG CTGCGCAAAG GCGAGGTGGA CGCGGTCGTC
TCCGTGGCAG CCAAGCCCGT GGCGGTGGTG GCGGGTTTCG CTCCAGGCGA TCGGTTTCAC
CTCATCCCCG CCAAGTACGG CCCTTCGATC TCGGACGACT ATCTGCCGGC CTCACTGACG
CGTCAGGATT ACCCGAACCT CGTCCGCGAC GAGGATGAAA TTGAGACGCT GGCGGTCGGG
ACCGTGCTGG GGGTCTACAA TCACCCGAAG GGATCCGAGC GTTATGCCAG GCTTGCCCGC
TTCGTGGATG CCTTCTTCGG CAAGTTCGAC GAGTTCCTGG CGCCTCAACG CCATTCGAAA
TGGCGGGATG TGAACCTCGC CGCCGAGGTC GGCGGATGGA CGCGGTTCGA GCCCGCGCAG
GAATGGCTTG ATGCCCACCG TGAGCCGCTC CCCGGCGCCG AGTTCATGGC CTTCCTCAAC
GAGCGGCGTC CGAGCGCATC GGCCGACAAG GAAGGATTGT ATCAAGCCTT TCTGCGCTGG
CGTCGAGATC GCGGCTCAGC CGATAAGGAA GGATTGTACC AGGTCTTTCT GCGCTGGCGT
CAAGATCGCG GCCATTCTTT AGCCGGTTCG CCGGAGCATA ACTCATCTCT GGTGAAAGTT
CAGCTTAGGT AA
 
Protein sequence
MSCKTRTTGL MALAVSALLL AGVPCSPAGA RDTSQAAGAS QAAGKQAVLS AGETEHAIGK 
RMNAATVSVV TGTPGGTYFR VGADLAFVLD DERLRVLPML GKGAGQNAYD LRFLKGVDLA
FLRTDTQEQL REDKRLASIA PHIRYIAKLF DDELHIIGPN SVTEARQLAG KRVTFDVKGS
GTDYSGRAMF RNLGVTVQAI NVDQPTAFEM LRKGEVDAVV SVAAKPVAVV AGFAPGDRFH
LIPAKYGPSI SDDYLPASLT RQDYPNLVRD EDEIETLAVG TVLGVYNHPK GSERYARLAR
FVDAFFGKFD EFLAPQRHSK WRDVNLAAEV GGWTRFEPAQ EWLDAHREPL PGAEFMAFLN
ERRPSASADK EGLYQAFLRW RRDRGSADKE GLYQVFLRWR QDRGHSLAGS PEHNSSLVKV
QLR