Gene M446_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_1321 
Symbol 
ID6134641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand- 
Start bp1454426 
End bp1455514 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content51% 
IMG OID641641601 
ProductTRAP-type uncharacterized transport system periplasmic component-like protein 
Protein accessionYP_001768272 
Protein GI170739617 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.107503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGCG CGAGCGGGCG ATATCGATGT GGCGCTGCCG TAGCAAGCTG GTTCATTGTT 
GGCCAAATCT TTTGCGTACC TGCCCTTATG GCTCAGACTC ACGAGCGAGC GCTCTTGACG 
AAGATCAGTG GCCGAGGCGA CCCGCATACA ATTGGCCTTA CCACCGCAGC AGGTACCGAC 
CAGTGGATCG CAAGTGATAT TTCCGCCGTT ATTGCCGACG GGCAGGAGAC CGGCCCAAGA 
GGTGAGATGG CGTTGCGCGT AGCAGTAACG GTTGGCATGG GGGGAATTCA GGATATTCGT 
GATCTTTTGA CAAAACCTGA TGTCGACATG GCTATTGTTC CGGCTGTTTT GTTTGATTTT 
GTCCGAAATA CTCAAGTAAG CAATGTCGTC TCACAGAAAA TTGCCTATAT CGTACCGCTC 
TACAAAGAAG AGTTGCATAT AATTGCCGGA CATAGCATCC AAAATATAGC TGATCTTTCT 
GGTAAAGCCG TTAACCTGGG AGTTTCGGGT GGCGCGACCG ACATACTAGG GCGCGAACTT 
CTCAACAAAA TGAATATTAG ATTTTGGCCA GTTAATATAA GTCAGCAAGA TGCACTGGAA 
AAAATTCGGG CCGGGGAACT CGCGGCCACC CTCACTATTG AGGGCAAGCC CCTGTCTTGG 
CTTTCGGAGT ACAAAAGAGA TGCAGGCTTT CATCTTGTTC CAATATCGAC GTCGCTAGTT 
GCTGACGATA TATACTCTCC GGCAGTTTTT ACTGATGGCG ACTACCCCAA CCTTATTGCC 
CCTGGTAGCG CCATCGATAC TGTCGCGGTA TTGGCGGTAT TGCTGGCGTA TGATTGGCCA 
GAGCGAAGCA GCCGCCGTCT CCTGCTGCAA AATTTTGTCC ACAAGTTCTT CTCGCATTTT 
GCCGAGCTTG CCACTGTGCC GAATCATCCA AAATGGAAAG AAGTCAACCT TAGTGCAGTC 
GTGCAGGGAT GGAGGCGCTT TGGCCCGGCC GAGAATTGGC TTCGCCAGAA CTCTGATGAT 
AATTCCCAGG CAGGCTTTGT ACAGTCAGGG GCAGCGCTTC GTTCGGACAA ACAGCGGCAG 
AGAAAATGA
 
Protein sequence
MRGASGRYRC GAAVASWFIV GQIFCVPALM AQTHERALLT KISGRGDPHT IGLTTAAGTD 
QWIASDISAV IADGQETGPR GEMALRVAVT VGMGGIQDIR DLLTKPDVDM AIVPAVLFDF 
VRNTQVSNVV SQKIAYIVPL YKEELHIIAG HSIQNIADLS GKAVNLGVSG GATDILGREL 
LNKMNIRFWP VNISQQDALE KIRAGELAAT LTIEGKPLSW LSEYKRDAGF HLVPISTSLV 
ADDIYSPAVF TDGDYPNLIA PGSAIDTVAV LAVLLAYDWP ERSSRRLLLQ NFVHKFFSHF 
AELATVPNHP KWKEVNLSAV VQGWRRFGPA ENWLRQNSDD NSQAGFVQSG AALRSDKQRQ 
RK