Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3808 |
Symbol | |
ID | 5832214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4229379 |
End bp | 4230482 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641369600 |
Product | hypothetical protein |
Protein accession | YP_001641253 |
Protein GI | 163853210 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.312034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGGC TTGGCCTGTA CGCCGCCCTT CTCGGGATCG CCCTGATGGC GAACGACCCT GTCGCGGCAG CCCCAGACAC CGCACCGGTC GAGGCCGCCC CCGCAACGGA AGCGGCCCTC GGCGAGCGCA TGAACGCCAA CACCGTCACG GTGGTGACCG GCACGCCCGG CGGAACCTAC TTCCGCGTCG GCGCCGAGCT CGCCTTCGTG CTCGATGACG GCGATAAGCT GCGGATCTTG CCGATGCTCG GCAAGGGAGC GGGCGAAAAC GCCTATGACA TCCGGTTCCT GAAGGGTGTT GATCTGGGTT TCGTTCGCAC CGATACCCTG GACCAGCTGC GGCAAGACAA GCGCTTGAGT AACATTGAGC GGCAAATCCA ATACATTGCC AAGCTCTTCG ACGACGAGTT GCATATCATC GCACCGAATT CGGTTCGGAC CGTTAGCGAT CTCGCCGGCA AGCGGGTCAG CTTCGATGTC AAAGGCAGCG GCACCGACTA CAGCGGCCGG GCCATGTTCC GCGAACTTGG CGTCACTGTG GAGGGGATCA ACGTCGATCA GCCCACCGCC CTCGAGATGC TACGCAACGG CGAGATTCAG GCTGTCGTTT CGGTGGCGGC TAAGCCGGTG GCTTTCATTG CGGGCTTCGA TCCGGGTGAG CGCTTCCACT TCGTGACGGC GCCCTACCCG GACACGATGA ACGAAGCCTA TGTCCCTGCG ACCCTGACGC GGACAGATTA TCCGAAGTTT GTCGGCGAAC AGGCGGTGGA GACCGTCGCG GTCGGCACGG TCCTCGGGGT CTACAACAGC CCGAAGGGAT CAGCGCGCTA TGAGAAGCTC GTCCGCTTCG TCGACGCCTT CTTCGGCCAG TTCGACAAGT TTCTGGCTCC GCAGCGGCAT CCGAAATGGC GGGAGGTCAA CTTCGCGGCC TCGGTGAAGG GCTGGAGGCG CTTCCGGCCG GCGCAAGAGT GGCTCGATCG CCACAAGGAG CAGGAGGCCG CTGCCCAGCC GGATCTGGAC CGGTTCTTCC AGTCACAGCC CGAGCGACCG GCCGGAAAGG AGGAAATCTA CCAAGCCTAT CTGAAGTGGC GCCAAGCGCG GTGA
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Protein sequence | MSRLGLYAAL LGIALMANDP VAAAPDTAPV EAAPATEAAL GERMNANTVT VVTGTPGGTY FRVGAELAFV LDDGDKLRIL PMLGKGAGEN AYDIRFLKGV DLGFVRTDTL DQLRQDKRLS NIERQIQYIA KLFDDELHII APNSVRTVSD LAGKRVSFDV KGSGTDYSGR AMFRELGVTV EGINVDQPTA LEMLRNGEIQ AVVSVAAKPV AFIAGFDPGE RFHFVTAPYP DTMNEAYVPA TLTRTDYPKF VGEQAVETVA VGTVLGVYNS PKGSARYEKL VRFVDAFFGQ FDKFLAPQRH PKWREVNFAA SVKGWRRFRP AQEWLDRHKE QEAAAQPDLD RFFQSQPERP AGKEEIYQAY LKWRQAR
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