Gene Mext_3808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3808 
Symbol 
ID5832214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4229379 
End bp4230482 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content63% 
IMG OID641369600 
Producthypothetical protein 
Protein accessionYP_001641253 
Protein GI163853210 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.312034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGGC TTGGCCTGTA CGCCGCCCTT CTCGGGATCG CCCTGATGGC GAACGACCCT 
GTCGCGGCAG CCCCAGACAC CGCACCGGTC GAGGCCGCCC CCGCAACGGA AGCGGCCCTC
GGCGAGCGCA TGAACGCCAA CACCGTCACG GTGGTGACCG GCACGCCCGG CGGAACCTAC
TTCCGCGTCG GCGCCGAGCT CGCCTTCGTG CTCGATGACG GCGATAAGCT GCGGATCTTG
CCGATGCTCG GCAAGGGAGC GGGCGAAAAC GCCTATGACA TCCGGTTCCT GAAGGGTGTT
GATCTGGGTT TCGTTCGCAC CGATACCCTG GACCAGCTGC GGCAAGACAA GCGCTTGAGT
AACATTGAGC GGCAAATCCA ATACATTGCC AAGCTCTTCG ACGACGAGTT GCATATCATC
GCACCGAATT CGGTTCGGAC CGTTAGCGAT CTCGCCGGCA AGCGGGTCAG CTTCGATGTC
AAAGGCAGCG GCACCGACTA CAGCGGCCGG GCCATGTTCC GCGAACTTGG CGTCACTGTG
GAGGGGATCA ACGTCGATCA GCCCACCGCC CTCGAGATGC TACGCAACGG CGAGATTCAG
GCTGTCGTTT CGGTGGCGGC TAAGCCGGTG GCTTTCATTG CGGGCTTCGA TCCGGGTGAG
CGCTTCCACT TCGTGACGGC GCCCTACCCG GACACGATGA ACGAAGCCTA TGTCCCTGCG
ACCCTGACGC GGACAGATTA TCCGAAGTTT GTCGGCGAAC AGGCGGTGGA GACCGTCGCG
GTCGGCACGG TCCTCGGGGT CTACAACAGC CCGAAGGGAT CAGCGCGCTA TGAGAAGCTC
GTCCGCTTCG TCGACGCCTT CTTCGGCCAG TTCGACAAGT TTCTGGCTCC GCAGCGGCAT
CCGAAATGGC GGGAGGTCAA CTTCGCGGCC TCGGTGAAGG GCTGGAGGCG CTTCCGGCCG
GCGCAAGAGT GGCTCGATCG CCACAAGGAG CAGGAGGCCG CTGCCCAGCC GGATCTGGAC
CGGTTCTTCC AGTCACAGCC CGAGCGACCG GCCGGAAAGG AGGAAATCTA CCAAGCCTAT
CTGAAGTGGC GCCAAGCGCG GTGA
 
Protein sequence
MSRLGLYAAL LGIALMANDP VAAAPDTAPV EAAPATEAAL GERMNANTVT VVTGTPGGTY 
FRVGAELAFV LDDGDKLRIL PMLGKGAGEN AYDIRFLKGV DLGFVRTDTL DQLRQDKRLS
NIERQIQYIA KLFDDELHII APNSVRTVSD LAGKRVSFDV KGSGTDYSGR AMFRELGVTV
EGINVDQPTA LEMLRNGEIQ AVVSVAAKPV AFIAGFDPGE RFHFVTAPYP DTMNEAYVPA
TLTRTDYPKF VGEQAVETVA VGTVLGVYNS PKGSARYEKL VRFVDAFFGQ FDKFLAPQRH
PKWREVNFAA SVKGWRRFRP AQEWLDRHKE QEAAAQPDLD RFFQSQPERP AGKEEIYQAY
LKWRQAR