| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4032 |
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| Symbol | |
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| ID | 4898953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 1179816 |
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| End bp | 1180862 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640114635 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001045882 |
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| Protein GI | 126464769 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0151449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.772934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGTTA TCAGACTGAT CGCGATTGCC CTGTTGCTCG TGGGCCTTCC GTCCCGGCTT
CCCGCTCTGG AGGTCAACAT GCTTACGGGA GGTCCGACCG GAACCTACAT CCAGATCGGC
CGCGACATCG CGAAGGCCGC CTCGGCCTGC GGCATCGAGA TGACCGTGCA TGAAAGCGCG
GGGTCGCTCG AGAATTTCCT CGGCGTCCGT CAGCGCCCGC GCACACAGTT CGGCATCGTC
CAGTCGGATG TGCTCGAATA TCTCAAGACC TTCGCCGCCG ACGATCCCGA GGTGAGCCGC
GCGATCTTCG GCGTCCGCAT CGCCTTTCCG CTCTACGACG AGGAGGTGCA TCTTCTGGCG
CGGAAGGAGA TCGGCAGCCT GAAGGACCTC GACGGCAAGC GCGTCTCGAT CGGGGTGGAG
AATTCCGGCA CCTTCCTCAC CGCCTCGCTC GTCCTCGACC TCGCAGAGGT CGCGCCCGGC
GAGCGCAGGA TGATGAACCA GGACGACTCG CTCAAGGCGC TGCTGGCCGG AGACATCGAC
GCCTTCTTCT ATGTAGCCGG TGCGCCTGCA AAAATCTTCG CCTCGCCCGA GATCGACGGC
GAGCGGTTCC ATCTGGTGCC GGTGGCCGAC GAAGTGCTGC GGCAGGTCTA CAAGCCCACC
CAGATCCCCG CCGGCAGCTA TCCGTTCCAG ACAGGGCCGG TCGATGCCAT CGCGGTCAAG
GCCGTGCTGA TGACCTACGG CTACGATCCC AAGCGCAACG CCTATCACCG CGAAAGCTGC
AAGGCGGTGT CGGACATCGC CCATGTGGTG AGCACCCATT TCCCCGAGCT CCAGCAATCG
GGCCATCCGA AGTGGAAGCA GGTGAACCTG ACCGACCTGC CGGCGGGCTG GGACATCGGC
GAATGCGTCA ATGCGGGTCT GGAACCCGGC TATCGGCTGC CCTGCGATCC GCCCGAGCCC
GCGGTGGCCG CCCCTGCCGA CGCTTCGGCC GAGAGCGAGG CGAACCGGGC CTACCGGCGG
CAGATCTGCG CCGTGGTGGG CTGCTGA
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| Protein sequence | MPVIRLIAIA LLLVGLPSRL PALEVNMLTG GPTGTYIQIG RDIAKAASAC GIEMTVHESA
GSLENFLGVR QRPRTQFGIV QSDVLEYLKT FAADDPEVSR AIFGVRIAFP LYDEEVHLLA
RKEIGSLKDL DGKRVSIGVE NSGTFLTASL VLDLAEVAPG ERRMMNQDDS LKALLAGDID
AFFYVAGAPA KIFASPEIDG ERFHLVPVAD EVLRQVYKPT QIPAGSYPFQ TGPVDAIAVK
AVLMTYGYDP KRNAYHRESC KAVSDIAHVV STHFPELQQS GHPKWKQVNL TDLPAGWDIG
ECVNAGLEPG YRLPCDPPEP AVAAPADASA ESEANRAYRR QICAVVGC
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