| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3556 |
|---|
| Symbol | |
|---|
| ID | 6134422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3969066 |
|---|
| End bp | 3970229 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641643723 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001770371 |
|---|
| Protein GI | 170741716 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.961167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.112141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTC TCGCGGCCCT CGCGATCTCG GTCGCTCTGC TCGCCGGGGC GCCGGGCTCC
CCGGCCCAGG CCCGGGAGGC GGCGCCGGCC GCCGAGAGCG AGGGGATGGT CGGCGACAGC
ATGAACGCGG CGACGGTCTC GATCGTCACC GGCACGCCGG GCGGCACCTA TTTCCGCATC
GGCGCGGACC TCGCCTTCGT GCTCGACGAC GGCAAGCAGC TGCGGATCCT CCCGATCCTC
GGGAAGGGCG CCGGGCAGAA CGCCTACGAC CTCCTGTTCC TGAAGGGTGT GGACCTCGCC
TTCCTGCGCA CCGACACGCT CGAGCAGCTG CGCGAGGACA AGCGGCTGAC CAAGGTCGAC
ACCCGCATCC AGTACATTTC CAAGCTGTTC GACGACGAAC TGCACATCAT CGGTCCGGTC
GACGTCACGG ATGCGCGGCA GCTCGCGGGC AAGCGCGTGA CCTTCGACGT CAAGGGCAGC
GGCACCGATT ACAGCGGCCG GGCGATGTTC CGGAAGCTCG GGATCGCCGT GCAGGCGATC
AACGTCGATC AGCCGACGGC GCTCGAGATG CTGCGCAAGG GCGAGGTGGA CGCCGTCGTC
TCCGTCGCCG CCAAGCCCGT GGCGATGATC GCGGGCTTCG ATCCGGGCGG CAAGTTCCAC
CTCATCCCGG CGAAGTACGC GGCCGCGGTC GAGGATGCCT ACCTGCCGGC CTCGCTCACC
AAGCAGGATT ACCCCAAGCT CATGGGACAG GCCGACGAGG TGCAGACGCT GGCGGTCGGC
ACGGTGCTCG GGGTCTACAA GCCCGTGAAG GGCTCGGCCC GCTACGCCAA GCTCACCCGC
TTCGTGGATG CGTTCTTCGG CAAGTTCGAC GAGTTCCTCG CGCCGCAGCG CCACCCGAAA
TGGCGCGAGG TCAACCTGGC CGCCGAGGTG AGCGGCTGGA CCCGGTTCCT GCCGGCCCAG
AAGTGGCTCG ACGCGCATCG CGAGCCGCAG ACCTCCGGGG GCGGAGACTT CACGGCCTTC
CTGAACGACC AGCAGCCGAG TGCCGCGACC GGCAAGGAGG AACTCTACCA AGCCTACCTG
CAATGGCGGA AAGGCCGCGG CCGCGCCATC AACAGCCTGG GCGAGAGGGT CCCGGACCGG
CAGACGAAGG GTTCGAGCTT CTAG
|
|---|
| Protein sequence | MTRLAALAIS VALLAGAPGS PAQAREAAPA AESEGMVGDS MNAATVSIVT GTPGGTYFRI
GADLAFVLDD GKQLRILPIL GKGAGQNAYD LLFLKGVDLA FLRTDTLEQL REDKRLTKVD
TRIQYISKLF DDELHIIGPV DVTDARQLAG KRVTFDVKGS GTDYSGRAMF RKLGIAVQAI
NVDQPTALEM LRKGEVDAVV SVAAKPVAMI AGFDPGGKFH LIPAKYAAAV EDAYLPASLT
KQDYPKLMGQ ADEVQTLAVG TVLGVYKPVK GSARYAKLTR FVDAFFGKFD EFLAPQRHPK
WREVNLAAEV SGWTRFLPAQ KWLDAHREPQ TSGGGDFTAF LNDQQPSAAT GKEELYQAYL
QWRKGRGRAI NSLGERVPDR QTKGSSF
|
|---|
| |